Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4145 |
Symbol | |
ID | 6208356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5360269 |
End bp | 5361234 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641693814 |
Product | formate dehydrogenase family accessory protein FdhD |
Protein accession | YP_001821019 |
Protein GI | 182415953 |
COG category | [C] Energy production and conversion |
COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.197477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACATC TCGCGCTGGA CGGCGCCTCG TTGCTGAGCA CAGTGCCGGC ACCACCCGCC GCGTGTTCCC CCGCGCCCCT TTTCCCCGTG TCCTCCGATC TCTGTTGCAC CGAAACCGAC GAGACACGCG CCGTCCGCGC CGCGCCGAGT TTGCGCTGGT CGCAACGCCG CGGCTGGTCC TCCGCCGCAG AGACCCTCGC GGTCGAAGCA CCTCTCGCCC TCGAGATCGC CTACGCGCGG GGCGAGCAGG ACGTCCGCAA GGTCCTCGCC ATCACCATGC GCACGCCCGG CCACGACGCG GAGCTCGCCG CCGGTTTTCT TCTCGCCGAG GGACTGATCA CGACCGGTGG CGACATCGTC ACCTCGACCG GGATGCCCGT GAACGCGCGC GGCGAACGCG TGGCCACGCA GCAGGTGCGT TTGCGCGCTG CGCCTCGCGA GGACCTGCAA CGCCTCAGCC GGGGACTGCT GACCAGTTCC GCGTGCGGCG TATGCGGGCG GCCTTCGCTC GAAGGCCTGC CGCTCGCGCG CGTGGCGCAG GATCGCGACG GCGCCACGTG GTCGTGCGCG ACACTCGCCG AGTTGCCCGA ACGGCTCCGA CGCGAGCAAA CACATTTCTC CGTGACCGGA GGTTCGCACG CCGCCGCGCT TTGGACGCGT GACGCGGGAC TGCTGGTCGT GCGCGAGGAC GTGGGTCGGC ACAACGCGGT GGACAAAGTC CTTGGCGCGG CGCTGCTCCG CAATGTCATC TGCACGGGCG CGGCGCTCGT GCTAAGCGGC CGCGCCAGTT TCGAACTCGT GCAAAAAGCT GCCGCCAGCG GCGTGCCGGT GGTGCTGGCG GTGGGCGCGC CGTCATCGTT GGCGGCCAGC CTCGCCCACG CCGCGGGGAT TACGCTGATC GGCTTCGCCC GCGACGCGCG CTTCAACGTC TACACCCACG CCGACCGACT CGCGATGGCC GGCTAG
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Protein sequence | MSHLALDGAS LLSTVPAPPA ACSPAPLFPV SSDLCCTETD ETRAVRAAPS LRWSQRRGWS SAAETLAVEA PLALEIAYAR GEQDVRKVLA ITMRTPGHDA ELAAGFLLAE GLITTGGDIV TSTGMPVNAR GERVATQQVR LRAAPREDLQ RLSRGLLTSS ACGVCGRPSL EGLPLARVAQ DRDGATWSCA TLAELPERLR REQTHFSVTG GSHAAALWTR DAGLLVVRED VGRHNAVDKV LGAALLRNVI CTGAALVLSG RASFELVQKA AASGVPVVLA VGAPSSLAAS LAHAAGITLI GFARDARFNV YTHADRLAMA G
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