| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4120 |
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| Symbol | |
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| ID | 6206789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5332398 |
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| End bp | 5333540 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693788 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001820994 |
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| Protein GI | 182415928 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.132007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAAAA ATCCGACCGT TTCCCGCTGG TGGCGCGGCG GCCTCGCCGC GGTGGGTTTG
ATTGTTGTTC TCCCATCAGG CCGGGGCGCG GATTACCCCC TCGCGCCCGC CCCGAGCGCT
CCCGCCGCCG AGCCCGCGGT CGCATATGTG CCGCCCGAAA ATCCCTCGGA ACTGCTGCGG
CTGGACGAAC CGATGCGCCG CTATTTCCGC GCCCGGCTCT CGCGCCACGC CTCGGGTTAC
GACCGGTTGT GCGCGCTCGT GGATTCGATC ATCCAGCCCG ATGGGCTGGC CTTTGCCTAC
GACGGGAACG GGACGTATGA CGCGCGGGAG ACGTTCCGCC GGCGCCGCGG CAATTGCGCC
AGCTTCGCCT TCCTCGTTGT GGCCGTCGCG CGCGAGTTCG ACATCGACGC GTCGTTTCAA
AACGTCGAGC GCGCGACGCG TTGGAACCGT GTCGGCGACA TGGTCGTCGC CGTACTGCAC
CTCGACGTGA AGGTGAGCAG CCAGGGCCGC AACTACATCA TCGACCTCGA GCCAGGGCTG
ATTCCGCCGC GCGACTCCTC CGATGTGCGC TTGATCCGCG ATGAGCGCGC GTTCGCCCAA
TTCTACTGCA ACATCGGCTT CGACGAGTTG GTGCGCGGCG ATGCGGACCG CGCGCTGCAT
TACATGGCGC GGGCGACCGA GATTGATCCG AGCTGCGCCA CGGCGTGGGC CAACCGGGCG
ACGCTGCTAA GCCGGCTGGG CGATCTCGCG ACCGCCAGAA AGTGCTTCGA ACGCTCGCTG
CGGGCCGATT CGCGGGGGGA AGCCGCGCTG GACGGGTTCG TCAGCCTGTT GCGCCAGCTC
GGCACACCCG CAGATCTGCA GCAGGCCGAC AAGCTGGAGC GCCGGGCGCG CGCCATCCGT
GAACGCAACC CCTATTACCA GCAGCAGCTC GCAGCGCAGG CGCAAGAGCA GGGCGACCTC
GCCCGCGCCG AAAAGCACCT GCGGCGTGCG ATTTCGCTCA AGGATGACGA GCCTGAATTT
TATGCGCAGC GGCTCGCGGT GCTGGAGCAG CTCGGGCGCA GCGACGACGC CCGCCGCGTC
GCCCGTCAGC TCGAAAATGT GCGCACCCGT CTCATGAACA TGCCCGAGCA AATCGTTCCC
TGA
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| Protein sequence | MSKNPTVSRW WRGGLAAVGL IVVLPSGRGA DYPLAPAPSA PAAEPAVAYV PPENPSELLR
LDEPMRRYFR ARLSRHASGY DRLCALVDSI IQPDGLAFAY DGNGTYDARE TFRRRRGNCA
SFAFLVVAVA REFDIDASFQ NVERATRWNR VGDMVVAVLH LDVKVSSQGR NYIIDLEPGL
IPPRDSSDVR LIRDERAFAQ FYCNIGFDEL VRGDADRALH YMARATEIDP SCATAWANRA
TLLSRLGDLA TARKCFERSL RADSRGEAAL DGFVSLLRQL GTPADLQQAD KLERRARAIR
ERNPYYQQQL AAQAQEQGDL ARAEKHLRRA ISLKDDEPEF YAQRLAVLEQ LGRSDDARRV
ARQLENVRTR LMNMPEQIVP
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