Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4118 |
Symbol | |
ID | 6204230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5330862 |
End bp | 5331938 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693786 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001820992 |
Protein GI | 182415926 |
COG category | [C] Energy production and conversion |
COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.433928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA CGATCATTCC TTTCGGTCCG CAACATCCCG TGCTCCCCGA GCCGGTGCAC CTGGATCTCG TGGTGGAAGA CGAGCGGGTC GTGGAAGCGC GGCCGTCGAT CGGATTCATC CATCGCGGGC TCGAACGCCT CGTCGAAAAA AAGGACTTCG TCGAGTTTGT GTACGTCGCC GAGCGGATCT GCGGAATCTG CAGCTTCATC CACGGCCAGA CCTACTGCCA GGGCATCGAG GAGATCATGC GTATCGCCGT GCCGCCGCGC GCCCGTTACC TACGCACGAT CTGGGGCGAG TTCTCGCGGC TGCACAGCCA TCTGCTCTGG CTCGGGCTCA TGGCGGATGC GATCGGGTTC GAGAACCTGT TCATGCATTC GTGGCGCGTG CGCGAGCAGG TGCTGAAGAT CATCGAAGCC ACGACCGGCG GCCGCGTGAT CTTCGGCGTG TGCAAGATCG GCGGCGTCCG TCGCGACATC CCCGCCGACG CCATTCCCGG CATCCTCGAC GAACTCACCG CGATCGAGGC GGGCATGCGC CGGCTCGCGG ACACGTTTCT CCGCGACCGC TCGGTACAGG ATCGGTTGCG CGGCGTCGGC GTGCTCTCGC GCGATGACGC GCACGCGCTC GGCTGCGTCG GACCGACCCT GCGCGCGAGC GGCGTCGCGC AGGATATGCG CCATCTCGGC TATGCCGCGT TCGGCGAACT GCCCGTCGAG CCGGTCACGC GGCTCGACGG GGACTCCTAC GCGCGCTGTG CCGTGCGTTG CGAGGAGTTG TTCCAGTCGG TCGACCTGAT CCGGCGCGCC TTCGCCGCGC TCCCCGCCGG CGAGATCGCG GTCAAGGTCA CGGGCAATCC CAGCGGCGAA TTCATCGCTC GCACCGAACA ACCGCGCGGC GAAGTCGTCT ATCACCTCAA GGCGGATGGC AGCCGAAACC TGCAGCGGTT CCGCGTGCGC ACGCCCACCT TCGCGAACTT GCCCGCGATG GTGAAACTCC TCCCAGGCTG CGAACTCGCC GATGTGCCGG TCCTCGTGCT GACCATCGAC CCCTGCATCA GCTGCACGGA GCGTTGA
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Protein sequence | MARTIIPFGP QHPVLPEPVH LDLVVEDERV VEARPSIGFI HRGLERLVEK KDFVEFVYVA ERICGICSFI HGQTYCQGIE EIMRIAVPPR ARYLRTIWGE FSRLHSHLLW LGLMADAIGF ENLFMHSWRV REQVLKIIEA TTGGRVIFGV CKIGGVRRDI PADAIPGILD ELTAIEAGMR RLADTFLRDR SVQDRLRGVG VLSRDDAHAL GCVGPTLRAS GVAQDMRHLG YAAFGELPVE PVTRLDGDSY ARCAVRCEEL FQSVDLIRRA FAALPAGEIA VKVTGNPSGE FIARTEQPRG EVVYHLKADG SRNLQRFRVR TPTFANLPAM VKLLPGCELA DVPVLVLTID PCISCTER
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