| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3958 |
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| Symbol | |
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| ID | 6205823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5134282 |
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| End bp | 5136717 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641693626 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001820832 |
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| Protein GI | 182415766 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0310982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCT TCCCGACTCC TGACGCAACA GGTCCCCTGA CCATCGCGCA GGCCTTCGCG
CACGCTCTTG CCCATCATCA AGCGGGAAGA CTAAAGGATG CGGAACGCCT CTACCGTAGC
ATCCTGGGTG TGGCTCCGCG CCATGCGGAC ACAAACCACA ACTTGGGGAT GATCGCATTG
CAGGCCAACC AACGACCAGC GGCAGTGCAG TTTTTCAGGG CCGCCCTGGA GGCAGAGCCA
CACCATGCTC AGTATTGGTT CAGCTACATT GCCGCGTTGA TCCACGCGGA CGAAATCGAC
GGCGCACGAA GCGCCTTCAA ACAAGCGGAA GACCGTGGCA TTGCGGGACC GCAGATGGCT
GAGTTATCGG CCCGGCTCAG CGCTGCAGGA AGCAAGCCAG AGCGACCTGA CGCACGCGAC
GTGCAAGCGC TGTTGAATCA CTTTGGTGCG GGACACTTTG AGGAGGCGGC AATGGCTGGG
CGGTCCATGA CAGCTAAATA TCCCCAGTAT GCACTGGGGT GGAAAGTGCT TGGTCCTGCC
CTCATGAAAC TCGGACAAAC GGCGGAGGCG CTGGATGCGA TGCAGACAGC TATTGCCCTC
TCGCCATCCG ACCCGCACGT CCACCATAAC CTGAGCACCG CATTGAAATC ACTCGGACGC
TTGGAGGAAG CTGCGGCGAG CGCCAGGCGC GCGTTGGGCC TGGGTGTAGA CGCCCATCTC
AATCTCGCCA GCATCGAATA CCAAAGCGGC CGGTACGACG AAGCAATCGC CTGCTGTCGG
CGGGCATTGG AGCTGAAGCA GGATTCAGTC GAAGGTCACG TGAAGCTTGC GAACGTGCTG
GTCCGCACTG GGCAACTGGA CGAGGCAACC GGCCACTACC GGCGAGCCTT GGAAATCGAA
CCCAACCTGC CCGCAGTGCA CAGGGCATTG GGAACGATCC TGCAAGATCA AGCACGCTAT
GACGAGGCGG CCGCCCACTT TCGACGTGCG TGCGACCTCC GCGCAACGGA CCTTTCGTGC
CAGATCTCGC TTCATCTAGC ATTGCCTGCA ATCGCTCAAA GCGGGGAGGC CATAGATCAG
AGCCGAACGC GTTTCCGATC TGCTCTCAAG ACTCTCGCCC GGTCGTCGGC TACGCTCGAC
GACCATGATG GTCCCCCTGT GGTGGCGTCC TTCTATCTCG CGTATCATGG TCAAGACGAT
CGGGACCTAA TGGAACTCAT CGGCGAGCTC TATCGGGATC GTTGGCCAGA GTTGTCTTTT
GTCTCACCCC ACGTGGCCGG GTGGCATTCT CCCACCGGCA CAGGACGCAA GATCCGCGTC
GGTTTTCTTT CCGCTTTCCT GACCGGGCAC ACGATCGGAA AGCTCTACCA GGGATTCCTG
CGCCACCTCG ACCGGCAGCG ATTCGAGGTT TATCTCATCC GGGCGCCAGA GTCCAAGCGC
GACGGGGTGG GTGCACAACT CGGTGCATAT TGTGACAAAG TGATCTCGCT CGCCGGCCCG
CTGCGAACTC AGCAGCAGCG TCTGGCGGAT CAGGAGTTGG ACGTACTCTT CTATCCGGAT
ATTGGCATGG CCCCGTACCC TTACTGCCTG GCTCACGCCC GATTGGCTCC CGTGCAAGCC
GTGAGTTGGG GGCATCCCGT CACCACCGGG TTGCGGACGA TTGACTACTT TGTTTCGGCA
CAACCAATCG AGCCACAGGG GGCTGCGGCT CACTATTCCG AGACACTGAT CCGACTTGAG
AGGTTGCCCT GCTTCTATGA GCCTTTCGTC GTCCCGAGCG CAATCCCGTC CCGGAGCGAT
CTGGACCTGC CTGCCACTGG GACTCTCTAC GGATGTCCGC AAAGCCTGTT CAAGTTCCAT
CCCGACTTCG ATGCCATCTT GGTCGCGATT GTCACAGGTG ATCCGGAAAG TCACCTCGTA
CTGCTCGAGG GCGCGGTGCC CATATGGAAG GAGCAACTAC GCACGCGCTG GGCGCGGACG
GCGCCTCTCT TGCTGAACCG CACGATTTTC CTGCCACGCC TCGAGCTTGA CCGATTCATG
GGAATGATCG CAAACATGGA CGTGCTCCTC GATCCCGTTC ATTTTGGCAG CGGCAACACG
CTCTACGAAG CCATGGCCTT CGGCGTGCCG ATTGTCACTT GGGCAGGTCA GTTCATGCGT
GGTCGAGTCG TCGCTGGCGC ATATCGTCAG ATGGGCATTA GCGATGCACC CGTTGCCGAG
CGGCTTGAGG ACTATGCCAA TCTGGCGGTG ACGTTGGGGC GCGACCCCGA ACGCCGGGCA
AGACTGCGCC GCGAGCTGAT AGCGGCTGCG CAACGCGACC TCTTTGCCGA CGCGCACGCC
GTCCGAGAAT TCGAAACCTT CCTCACGGCC GCCGTGAGTG CGGCGGACGA GCAGCGAAAA
CTTTCCTCCG ATTGGCGTTA CGACGCCGCC TCGTGA
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| Protein sequence | MTAFPTPDAT GPLTIAQAFA HALAHHQAGR LKDAERLYRS ILGVAPRHAD TNHNLGMIAL
QANQRPAAVQ FFRAALEAEP HHAQYWFSYI AALIHADEID GARSAFKQAE DRGIAGPQMA
ELSARLSAAG SKPERPDARD VQALLNHFGA GHFEEAAMAG RSMTAKYPQY ALGWKVLGPA
LMKLGQTAEA LDAMQTAIAL SPSDPHVHHN LSTALKSLGR LEEAAASARR ALGLGVDAHL
NLASIEYQSG RYDEAIACCR RALELKQDSV EGHVKLANVL VRTGQLDEAT GHYRRALEIE
PNLPAVHRAL GTILQDQARY DEAAAHFRRA CDLRATDLSC QISLHLALPA IAQSGEAIDQ
SRTRFRSALK TLARSSATLD DHDGPPVVAS FYLAYHGQDD RDLMELIGEL YRDRWPELSF
VSPHVAGWHS PTGTGRKIRV GFLSAFLTGH TIGKLYQGFL RHLDRQRFEV YLIRAPESKR
DGVGAQLGAY CDKVISLAGP LRTQQQRLAD QELDVLFYPD IGMAPYPYCL AHARLAPVQA
VSWGHPVTTG LRTIDYFVSA QPIEPQGAAA HYSETLIRLE RLPCFYEPFV VPSAIPSRSD
LDLPATGTLY GCPQSLFKFH PDFDAILVAI VTGDPESHLV LLEGAVPIWK EQLRTRWART
APLLLNRTIF LPRLELDRFM GMIANMDVLL DPVHFGSGNT LYEAMAFGVP IVTWAGQFMR
GRVVAGAYRQ MGISDAPVAE RLEDYANLAV TLGRDPERRA RLRRELIAAA QRDLFADAHA
VREFETFLTA AVSAADEQRK LSSDWRYDAA S
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