| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3880 |
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| Symbol | |
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| ID | 6205159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5038637 |
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| End bp | 5039497 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693548 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001820754 |
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| Protein GI | 182415688 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.28993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0214025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACC ACAAATATCA CGCTCTCGGC AACGACTACA TCGTCCTCGA TCCGCGCGAT
TTCCCGTCGT GGCAGCCCGC GCCCACGATC GACCAGATCC GCGTGGTCTG TCATCGCAAC
TTCGGGGTCG GCTCCGACGG CATCCTGTGG GGCCCGTTGC CCTCCAAACA AAGCGAGTTC
GGGCTGCGCA TCTTCAATCC AGACGGTTCC GAGGCGGAAA AGTCCGGCAA CGGGCTGCGA
ATCTTTTCCC GTTTTCTGTG GGACCAGAAG CTCGTGCGCG CACCCGCCTT CACCGTCGAG
ACACCGGGCG GCAACGTGGA ATCGGTCATC AAGGAAAACG GCCGGTTGAT CACCGTGGCG
ATGGGCCGCG TCAGCTTCGA CAGCGCGAAG ATCCCGGTGA ATCTCGCCGG CGCGGCCCGC
GAGGTCATCA ACGAGAAACT CACCGTGCTG GATCGCGAGT TCACCTATTG CGCCGCCACG
ATCGGCAATC CGCATTGCGT GATTCCGCTC GCCGAGATCT CGCCCGAAAT TGCGCATCGC
TACGGTCCAG CCATCGAGAC GCATCCGAAT TTCCCGCGCA AAACCAACGT CCAGTTTCTG
CGCGTCCGTG ATCGGCAGAA TATCCAACTC GAGATCTGGG AACGCGGCGC TGGTTACACG
CTCGCCTCGG GCAGTAGCTC GAGCGCCGCA GCCGCGGTGG CGCACCGGCT CGGATTGGTG
GATCGCAACG TCACCGTCCA CATGCCCGGG GGCACGATCG GCATCGAGAT CGGCGGCGAT
TTCTCGATCA TGATGACCGG CACGGTGAAC AAGGTGGCCG AGGGAACGAT GCACCCCGAG
TTGTTCGCGG TGAAGGTCTG A
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| Protein sequence | MRYHKYHALG NDYIVLDPRD FPSWQPAPTI DQIRVVCHRN FGVGSDGILW GPLPSKQSEF
GLRIFNPDGS EAEKSGNGLR IFSRFLWDQK LVRAPAFTVE TPGGNVESVI KENGRLITVA
MGRVSFDSAK IPVNLAGAAR EVINEKLTVL DREFTYCAAT IGNPHCVIPL AEISPEIAHR
YGPAIETHPN FPRKTNVQFL RVRDRQNIQL EIWERGAGYT LASGSSSSAA AAVAHRLGLV
DRNVTVHMPG GTIGIEIGGD FSIMMTGTVN KVAEGTMHPE LFAVKV
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