Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3876 |
Symbol | |
ID | 6207429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5033667 |
End bp | 5034206 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693544 |
Product | hypothetical protein |
Protein accession | YP_001820750 |
Protein GI | 182415684 |
COG category | [R] General function prediction only |
COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
TIGRFAM ID | [TIGR03406] probable FeS assembly SUF system protein SufT |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.107724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0166162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATC ACGTTCTCCA ACGCGCCACG CCGGCGACGA TGATCCCCGC GGGCGACGCT ACCACGCTGC CCGCCGGGAC CGAAGTGCAC ATCGTCCAGA CCCTGGGCGG CAACGTGACC GTGCGCACGG ATCACGGGCT GTTCCGGATC GCCGCCGAGC ATGGGGACGC GATCGAAGGT TATGTGCCGA AGTCCGCGAG TGTCGGCGGC GAGCCGGTGC AGGGCGAGTT CAGCGAGCAG ATGGTGTGGG ATGCGTTGAA GACCTGTTTC GATCCGGAGA TTCCGGTGAA CATCGTCGAT CTCGGACTGG TGTACGATCT TGCGGCGGAG AAGACGCCGA CGGGCGGCTT TGCGGTCGAG GTGAAGATGA CGCTGACCGC CCCGGGTTGC GGAATGGGTC CGATCATTGC CGAGGACGCG CGCGAGAAGA TTGCGCGGCT CCCGCAGGTG GAAGCGGCGA AAGTGCACAT CGTCTGGGAT CCCGTGTGGA CGCCGCAGAT GATTTCGACC GAAGGCCGGC AGGTGCTCGG GTTGGAGTAG
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Protein sequence | MSNHVLQRAT PATMIPAGDA TTLPAGTEVH IVQTLGGNVT VRTDHGLFRI AAEHGDAIEG YVPKSASVGG EPVQGEFSEQ MVWDALKTCF DPEIPVNIVD LGLVYDLAAE KTPTGGFAVE VKMTLTAPGC GMGPIIAEDA REKIARLPQV EAAKVHIVWD PVWTPQMIST EGRQVLGLE
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