| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3704 |
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| Symbol | |
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| ID | 6207013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4812170 |
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| End bp | 4813423 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641693370 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820579 |
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| Protein GI | 182415513 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.190171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGT CGCTCGGCGC GCTCGTCGGC GGACTGATGG CATTGGTCGT GGCAACGCCC
TGGCTGCGTG CGGCAGACGA TGTCGAGGCT GACCGGGAAT CGATCCGGCG GCACCGGATG
GGTACGCTGG TGGTGCACAC CGTGCCCGGA GCGACGGTGC AGGTGGAGCA GGTGAAGCAC
GAATTCTGGT TCGGCGCGGC GCTGGCGAAC CAGGCCTTCG ATGGCCGGAT GCCCGCAGCC
GATCGCGAAC GCTACCTCGC GACGTTTTTG GAAAACTTTA ACGCGGCCGT CACCGAAAAC
GCGCTGAAAT GGATGGCGAT GGAGCCGAAG CGCGGCGAGC GGGACTACGC GACGGTCGAT
GCGATTCTCG CCTGGGCTGA TCAGCATGAG GTACCGCTGC GCGGTCACAA CCTCTACTGG
GGCGTGCCGA AATGGACGCA GGCATGGATC AAGGAGCTCG ATGACGCGAT GCTGCGACAG
ACCATCGAGG AACGCGCACG GGACATCGGC CGGCGTTATC GCGGCCGGTT TGCCGAGTAC
GATCTCAACA ACGAGATGAT CCACGGCAAT TACTATGCCG ACCGGCTCGG GCCGCGCGTC
ACGCTCGACA TGGCGCAATG GATCAAGGCC GAGGACCCGT CCGCGCGGCT GTTCGTCAAC
GATTATGACA TTCTCACCGG CCGTCGGTTG GCGGACTACC TGGCGCACAT CCGCGAGCTG
TTGGCCATGG GCGTGCCGAT CGACGGCATC GGGGTGCAGG GACATTTGCA CGGCGATACG
TTCGACGCGG CGGCACTGCG GAGCGCGCTC GACGAACTGG CGCAGTTTCA CCTGCCGATC
CGGGTGACGG AGTTCAACTT TCCCGGTCAG CGTTCGAAGT TCTACCAGCA ACGCGAACTC
GCGATCACCG CCGAGGAAGA AGACGCCAAG GGCAGGGCGA TCGCGGACTA CTATCGAATC
TGCTTCGCGC ATCCTGCCGT CGACGGCGTC CTGATGTGGG GCTACTGGGA AGGGGCGAAC
TGGATCCCGC AGGCCTCGCT CTACAAACAG GATTGGAAGC CGACTCCGGC GCTGAAGGCC
TACCGCGATC TCGTGTTCGG AGAGTGGTGG ACACGTTGGG AGGGGAAGGC CGACGAAAGC
GGACGGTGCG TCGTGCCAGC GTTTTTCGGA CGGCACCTAG TCCGCGCCGC GGGCCAGCAG
AGGCAGGTCG AGCTGGCGAA GCGGCACGGG ATCGCGACCG TGGACTTTCG CTAA
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| Protein sequence | MTRSLGALVG GLMALVVATP WLRAADDVEA DRESIRRHRM GTLVVHTVPG ATVQVEQVKH
EFWFGAALAN QAFDGRMPAA DRERYLATFL ENFNAAVTEN ALKWMAMEPK RGERDYATVD
AILAWADQHE VPLRGHNLYW GVPKWTQAWI KELDDAMLRQ TIEERARDIG RRYRGRFAEY
DLNNEMIHGN YYADRLGPRV TLDMAQWIKA EDPSARLFVN DYDILTGRRL ADYLAHIREL
LAMGVPIDGI GVQGHLHGDT FDAAALRSAL DELAQFHLPI RVTEFNFPGQ RSKFYQQREL
AITAEEEDAK GRAIADYYRI CFAHPAVDGV LMWGYWEGAN WIPQASLYKQ DWKPTPALKA
YRDLVFGEWW TRWEGKADES GRCVVPAFFG RHLVRAAGQQ RQVELAKRHG IATVDFR
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