Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3559 |
Symbol | |
ID | 6205949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4633045 |
End bp | 4634577 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693227 |
Product | xylulokinase |
Protein accession | YP_001820436 |
Protein GI | 182415370 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTCT TCATCGGCAT TGATTCCGGC ACACAGAGTG TCAAAGCGAT CGTCCTCGAT CTCGAGACCC GCAAGGTCGT GGCGGAGGCG CGCGCGCCTC ACCAGTTGAT CGAAGGGCTG CCCGTTGGGC ACATGGAGCA GCACCCGGAG GATTGGACCT CCGCGCTCGA CTTCGTGATC GGCGAGGTGG TGGCGAAGAT CGGGGCCGAG CAGGCGAAGC GCGTGCGCGG GATCGGCGTG TCCGGCCAGC AGCACGGCTT TGTGCCGCTG GACGAGAACG GCGCAGTCAT CCGGCCGGCG AAACTCTGGT GCGATACGAG CACGGCGCCG GAATGCGCGA TCATCACGAA AAAACTCGGC GGGCCGAAGG CGGCGATCAG GAAGACCGGC AATCTGATTC TGCCGGGATT CACCGCGCCG AAAATCCTCT GGCTGAAGCG CCACGAGCCC GAGAACTACA AGAAGCTCCG GCACGTGCTG CTGCCGCACG ACTATCTCAA TTTCCACCTC ACCGGGAATT ACTTCATGGA GTTCGGCGAC GCTTCGGGCA CGGCGATGAT GGACGTGCGG ACGCGCAAGT GGTCGAAGGA CGTGATCGCT GCGATCGATC GGAAGCTGGC CGACTACCTG CCGCCGATTT CCGAATCGCA TCAAGCCGCA GGCACGCTGC GCGCGGAGCT GGCGGCGAAA TACGGACTCT CGACTGACGT GGTCGTCAGC GCCGGCGGTG GCGACAACAT GATGGGCGCG ATCGGCACCG GCAACGTGGC GCCGGGCGTG GTGACGGCGA GCTTCGGCAC GAGCGGCACG ATTTACGCGT TCGCGAGCAA GCCGGTGATT GATCCGCAGG GCGAGATCGC GGCGTTCTGC TCGTCGACCG GCGGCTGGCT GCCATTGCTC TGCACGATGA ATGTCACGAC CGTGACGGAG CAGATCCGCA CGCTGTTCGG GCTCGACGTG CGCGCGCTCG ACGATTCCGC GGCGAAAGCG CCGGCGGGTG CGAACGGGCT GATCCTGCTG CCGTATCTGG CCGGCGAGCG CACGCCGAAC GTGCCGGACG GCTCGGGCGT GTTCTTCGGG TTGAACCAGA AAACCTTCAA CGCAGCGCAC CTGAACCGTG CCGCGATGGA GGGCGTGACC ATGGGCATGA ACTACGGTCT GCGCCGGCTC GCAACGCTCG GGGTGAAGGC GAAGGAAATT CGCGTCACGG GCGGCGGCTC GAAGTCGCCG TTCTGGCGGC AGATGATGGC GGACATCTTC GGCGTGCCGG TGGTCGGCAT GGTCGAGGAT GAAGGCGCGG CGCTTGGCGG CGCGTTGCAG GCCGCGTGGT GCGTGGCGAT CCGCGACGGC AACAAGAAGG CAAAGCTGAC GGATTTCACC ACGGGCACGG TGGCGCTGGA CGAGTCGACG CGGTGCACGC CGAACAAGGC GAACGTCGCG CGTTACCGCG AACTGCAGGC GTTGCAGGAC AAGCTCAGCC TCGCGCTGCG CGAGGTGTTT GCCGACCAGC GCGCGCTGGC GAACAAGGCC TGA
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Protein sequence | MSLFIGIDSG TQSVKAIVLD LETRKVVAEA RAPHQLIEGL PVGHMEQHPE DWTSALDFVI GEVVAKIGAE QAKRVRGIGV SGQQHGFVPL DENGAVIRPA KLWCDTSTAP ECAIITKKLG GPKAAIRKTG NLILPGFTAP KILWLKRHEP ENYKKLRHVL LPHDYLNFHL TGNYFMEFGD ASGTAMMDVR TRKWSKDVIA AIDRKLADYL PPISESHQAA GTLRAELAAK YGLSTDVVVS AGGGDNMMGA IGTGNVAPGV VTASFGTSGT IYAFASKPVI DPQGEIAAFC SSTGGWLPLL CTMNVTTVTE QIRTLFGLDV RALDDSAAKA PAGANGLILL PYLAGERTPN VPDGSGVFFG LNQKTFNAAH LNRAAMEGVT MGMNYGLRRL ATLGVKAKEI RVTGGGSKSP FWRQMMADIF GVPVVGMVED EGAALGGALQ AAWCVAIRDG NKKAKLTDFT TGTVALDEST RCTPNKANVA RYRELQALQD KLSLALREVF ADQRALANKA
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