| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3550 |
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| Symbol | |
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| ID | 6206452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4625335 |
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| End bp | 4626309 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693218 |
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| Product | integrase family protein |
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| Protein accession | YP_001820427 |
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| Protein GI | 182415361 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.74971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTGTG GTTCACTCGT GTACGTGGAG CCTGCGAATC CAAAGGCCGA AGCCGCGCTG
CCAGCCGAGG TGCAGGCGGA GTGGTGGCAG CCGTTCGAGA ACTACCTCGC GCACGAGCGG
CGGTATTCGG CCTACACCGT GCGCAACTAC CGGCAGGCGT TTGAGGATTT CTACCGCTGG
CTCGTGCTGG CGGGCGTATG GGAGCGCGGA TTCGACGCGC TGCAGATGCG CGAGCTGCGC
GACTTCGTGA TCGAAGCGCA GCGGCGGTTC GGACGCCGGA CGCTGCATAA CCACGTGTCG
GGGTTGCGAT CGTTCTTCAA ATTCTGGCTG CGCCGCGGCA AGGTGCAGCG CAATCCCTTC
CTCGGTGTGC CGCTGCCGAA ACTGGAGAAG CGACTGCCGA AATTTTTGAC CGAGGAACAG
ATGGTCCGGC TGTTGGCCGG TCCGCAGCAG TTACTGGCGA GCGAGAGCAT CGATGCCTTC
ACGGCGCATC GCGACCGGCT GGTACTGGAG CTTCTCTACG GCGCGGGGCT GCGGGTCAGC
GAGCTGACCG GGCTCAACTA CGGCGCGATC GATCTGGAGG CGGGGGTCGC GCGGATCGTG
GGCAAAGGCC GCAAGGAGCG GCTGTGTCCG ATCGGACGCG TCGCGGTCGC GGTGCTGCGG
AAATTCCGCG ACGAGTTCGC GCCTGCCACG GCGCCAGACG CGCCGGTGAT CGTCACCCAA
CGGGGCACGC GGATGTCACC GCGCGAGGTG CAGTTGATGC TGAAGCGCTA TCTCGCGCTG
GCCGAGCTGC CGATGGACCT GACGCCGCAC AAGCTGCGGC ATTCGTATGC CACGCATCTG
CTCAACGCGG GCGCCGACCT GCGGCTCGTG CAGGAACTGC TCGGCCATGC GCAGCTCGCG
ACCACGCAAG TCTACACGCA CGTGAGCGTG GCGCGGCTGA AGGAGATCTA CGCCAAGGCG
CATCCGCGGG CGTGA
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| Protein sequence | MDCGSLVYVE PANPKAEAAL PAEVQAEWWQ PFENYLAHER RYSAYTVRNY RQAFEDFYRW
LVLAGVWERG FDALQMRELR DFVIEAQRRF GRRTLHNHVS GLRSFFKFWL RRGKVQRNPF
LGVPLPKLEK RLPKFLTEEQ MVRLLAGPQQ LLASESIDAF TAHRDRLVLE LLYGAGLRVS
ELTGLNYGAI DLEAGVARIV GKGRKERLCP IGRVAVAVLR KFRDEFAPAT APDAPVIVTQ
RGTRMSPREV QLMLKRYLAL AELPMDLTPH KLRHSYATHL LNAGADLRLV QELLGHAQLA
TTQVYTHVSV ARLKEIYAKA HPRA
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