| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3541 |
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| Symbol | |
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| ID | 6204491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4611596 |
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| End bp | 4613827 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693209 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001820418 |
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| Protein GI | 182415352 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACG CCGCCTCGCC TTCCGCTCCC GTCCTCGCCT CCGGTCTCGT TTCCGAGGAA
CAGCAGACCC ACTGGCGGCT GGCTTGGCTC GCCACGGTCG ACCACAAGCG CATCGGCGTG
CTCTACCTGC TGTTCGCGCT GTTGTTTTTC GTGATCGGCG GACTCGAGGC GCTGTTCATC
CGGCTGCAGC TCGCGGTGCC CAACAACACG CTGGTTTCCG CAAACACGTT CAACGCGTTG
TTCACGATGC ACGGCACGAC GATGATCTTC CTCGTCGCCA TGCCCGCGCT GTTCGGCCTG
GCGAATTACT TCGTGCCGCT GATGATCGGC GCGCGCGACA TGGCCTTTCC GCGGCTCAAC
GCGCTGAGCG TCTGGCTCCT CCCGCTCGGC GGCGCGCTCC TGCATTTCTC GATCTTCACC
GGCGTGCCCA AGGTCGGCTG GTTCGCCTAC GCGCCGCTGA GCGAGACGCC TTACAGCTCC
GAGCGCGGCG TCGAATACTG GATCCTCGCG CTCATCGTGC TCGGCATCGG CTCCGTCGCC
ACCGCGGTCA ACCTCATCGC CACCACGCTC AGCATGCGCG CGCCGGGCAT GACGATGCGG
CGGCTGCCGC TGTTCGTGTG GATCAACTTC GTCAACTCCT TCATCGTCAT CTTTGCGCTG
CCGGTGCTGA ACGCCGGCCT CGTGATGCTG CTGATGGACC GCCAGCTCGG CACGCACTTT
TTCCTCGCGC GCGAGGGCGG CTCACCGGTG CTGTGGCAGC ACATCTTCTG GGCCTTCGGT
CATCCCGAGG TCTACATTCT CGCGCTGCCC GCGTTCGCCA TCATCTCCGA GGTCGTCCCG
GTTTTTTCGC GGAAGCCGAT CTTCGGCTAC GAATTCGTGG CGATGTCCTC GGTCGCGATC
GCGCTGCTGA GCTTCGGCGT CTGGGCGCAC CACATGTTCA CCGTCGGCAT GGGCTTCGCC
GCCGACGCCT TCTTCGCCAT CGCCTCGATG CTCATCGCCA TCCCCACCGG CGTGAAGGTG
CTCAACTGGA CCGCCACGAT GTTCCAGGGC CGGATCCAAC TGACGGTGCC AATGCTCTAC
GCGATCGCGT TCGTGATTCA GTTCACCGCC GGCGGATTGA GCGGGGTCAC GCACGCGTCC
GCCGCACTCG ATTGGCAGAC CAAGAACAGC TACTACCTCA TCGCCCACTT TCACTACGTC
GCCGTCGGCG GCGTGGTGTT CGCGATCCTC GCGGGACTGC ACTACTGGTT CCCGAAGATG
AGCGGCCGGA TGCTCTCGGA AAAACTCGGC CGCTGGACGT TCGCGTTCAT GGTGCTCGGC
TTCAACGGCA CGTTCGCGAT CCAACACTTC CTCGGATTCA TGGGCATGCC GCGGCGCGTT
TACACGTATC CCGATTTCAC GCACTGGGGC TGGATGAACT TCGTCTCGAC GACCGGCGCC
TGCCTGATGG GCGTCGCGGC CGTGCTGCTG GTGATCAATT TACTCCGGAG CTATTTCCGC
GGCGCGCCCG CTGGCGCCAA CCCGTGGAGC GCCTGGACGC TGGAGTGGGC CACCACCTCG
CCTCCGCCCG TCTACAATTT CACCGCGCTG CCGCCGCTGC ACAGCCGCCG GCCGCTCTGG
GATACCGCAA ATCCCGACCG ACCCGATCCG CGCGTCGGCA CGTCCGGCGC CATCCTCGCG
CCCGATCGCT CGAAGACGTC CGTCTGGGCG CTGATCGCCT CGGAGGCGGC GTTCTTCGGC
ACGCTGCTCT TCGTGTTCCT CTACTTCAAC CTGCGCCCGC CGGCCGGCGC CAACGCGAAG
AACAGTCTCG AACTCGCGCC AACGCTGATG TTCAGCGCGT GCCTGTTCGC CAGCAGCTTC
ACGCTGTGGC GCGCCGAGGT CGCCGAACAC CGGCAGCACC ACGGCGGCAT GATCGGCTGG
CTCGCGCTCA CGATCGCACT CGGCGCCACC TTCATCGGCG GCCAGGCCTG GGAGTATTAC
CACCTCTACC ACAGCGGCGT CACGGTCGGC ACCAACCTGT TCGGCGCCTC GTTCTATCTC
GTCACCGGCT TCCACGGCTT TCACGTCGTC GCCGGTCTCA TCGCCCTCGC CATCGTACTC
GGGCTGGCAA TGGGCGGCGA CTTCCGGACG CGTCGCTCCC CACTGGTGGC GATCGGACTC
TACTGGCACT TCGTCGACGT CGTGTGGGTG TTCGTCCTCG CCATCGTCTA CTTCCTCCCG
CGCTTCCTAT GA
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| Protein sequence | MNHAASPSAP VLASGLVSEE QQTHWRLAWL ATVDHKRIGV LYLLFALLFF VIGGLEALFI
RLQLAVPNNT LVSANTFNAL FTMHGTTMIF LVAMPALFGL ANYFVPLMIG ARDMAFPRLN
ALSVWLLPLG GALLHFSIFT GVPKVGWFAY APLSETPYSS ERGVEYWILA LIVLGIGSVA
TAVNLIATTL SMRAPGMTMR RLPLFVWINF VNSFIVIFAL PVLNAGLVML LMDRQLGTHF
FLAREGGSPV LWQHIFWAFG HPEVYILALP AFAIISEVVP VFSRKPIFGY EFVAMSSVAI
ALLSFGVWAH HMFTVGMGFA ADAFFAIASM LIAIPTGVKV LNWTATMFQG RIQLTVPMLY
AIAFVIQFTA GGLSGVTHAS AALDWQTKNS YYLIAHFHYV AVGGVVFAIL AGLHYWFPKM
SGRMLSEKLG RWTFAFMVLG FNGTFAIQHF LGFMGMPRRV YTYPDFTHWG WMNFVSTTGA
CLMGVAAVLL VINLLRSYFR GAPAGANPWS AWTLEWATTS PPPVYNFTAL PPLHSRRPLW
DTANPDRPDP RVGTSGAILA PDRSKTSVWA LIASEAAFFG TLLFVFLYFN LRPPAGANAK
NSLELAPTLM FSACLFASSF TLWRAEVAEH RQHHGGMIGW LALTIALGAT FIGGQAWEYY
HLYHSGVTVG TNLFGASFYL VTGFHGFHVV AGLIALAIVL GLAMGGDFRT RRSPLVAIGL
YWHFVDVVWV FVLAIVYFLP RFL
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