| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3495 |
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| Symbol | |
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| ID | 6207798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4548181 |
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| End bp | 4549074 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693162 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001820372 |
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| Protein GI | 182415306 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.335831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCG ACCGCCCCTA TATGCGCGAC GATTACCCGC GCAACCGCAC GACGGTGCTG
ACCTGGCTGA TTTCCGCCAT TGTCGCGATG TTCGTGCTAC AGCACCTGTT GTGGCGGTTG
TTCAACGCCG ACACCCTGCT GGACCAGTTG CTGGGGCTGA GCGTCGCGAA CCTCAAGGCG
GGCCGGATCT GGACGCTCGT CACGTACAGC TTCCTGCACT CGAAGGCGAA CTTCCTGCAC
ATCATCGCCA ATCTGCTCGG GCTGTATTTC GTCGGCCGGG TGTTGCTGCC GGTGCTGGGA
TCGCGGCGCT TCCTCGGACT CTACGCCGCG GCCGTGGGCC TGGGCGGCGC GCTGTGGCTG
GGCACGCATT GGAGCGCCGG CACCGGCACG CTGATCGGCG CGTCCGCCGG CGTGCTCGGG
CTGTTCATGC TGTTTGCCTG TCTGAACCCG AACCAGCCGA TGACGTTCCT GCTGTTCTTC
ATCGTGCCGG TCACGTTGCG GCCCAAATAT GTCGCCGCCG GTTTGCTGGC TTTTGAGCTG
CTGGGCTTCG GTTTCTACGA GGTGATGGGC GCGGTTTCGC CGTTCGGCGC TCCCTTGGCC
CATTCCGCTC ACTTGGGGGG GATGCTCGCC GGTTGGGTGT TCTTCCGCAC CTTCCACGCC
AGCCGCGGCT GGTTCCGGCC CTCCCGCCCG GACGTCGAAT TGCCGCGTTG GATGCAAAAG
ACCCCCAAAG CCGCGCCGCC CCCCGTTTAC CAGGTCGACG TCACCAAACG CGAGGACCTG
CGCGCGGAGG TGGATCGCAT CCTCGATAAA ATCAACAGTC ATGGTTTCGG GGCGCTGACC
GAGGAGGAAA AACGGCTGCT GGATGAGGCG CGTGACCTGC TCAGCCGCCG TTGA
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| Protein sequence | MLSDRPYMRD DYPRNRTTVL TWLISAIVAM FVLQHLLWRL FNADTLLDQL LGLSVANLKA
GRIWTLVTYS FLHSKANFLH IIANLLGLYF VGRVLLPVLG SRRFLGLYAA AVGLGGALWL
GTHWSAGTGT LIGASAGVLG LFMLFACLNP NQPMTFLLFF IVPVTLRPKY VAAGLLAFEL
LGFGFYEVMG AVSPFGAPLA HSAHLGGMLA GWVFFRTFHA SRGWFRPSRP DVELPRWMQK
TPKAAPPPVY QVDVTKREDL RAEVDRILDK INSHGFGALT EEEKRLLDEA RDLLSRR
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