| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3360 |
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| Symbol | |
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| ID | 6207794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4394117 |
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| End bp | 4395940 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693025 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001820237 |
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| Protein GI | 182415171 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.814662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGA ACATCCGTAA TATCGCCATC ATCGCCCACG TCGACCATGG GAAGACCACC
CTCGTCGACC AGTTGCTGAA GGAAGGCGGA GCTTTCCGCG CCAACCAGCA CGTGGACGAA
CGCGCCATGG ACTCGATGGA TCTTGAGCGC GAAAAGGGCA TCACGATCAA GGCCAAGAAC
ACCTCCATTC ACTGGCACGA CAAGATCATC AACATCGTCG ACACGCCCGG CCACGCCGAT
TTCGGCGGCG AGGTGGAGCG GGCGCTCCGG ATGGTCGACG GCGTGCTGCT CGTCGTCGAT
GCCTACGACG GCCCGCAGGC CCAGACCCGT TTCGTCCTCC GCAAGGCGCT GAACCACGGG
CTCAAGGTCG TGATCGTCAT CAACAAGATC GATCGCGAAA ACGCCGAGCC CGCCAAGATG
TATGACAAGG TGCTCGAGCT GCTGATGGAG CTCAACGCCA CCGAGGAGCA GTTCGACGCG
CCGGTCGTCT ACGGTTCCGG CCGCGACGGC TACATGATGA AGAAGCTGGA CGACAAGCGG
GAGAACATGG CTCCCCTCTT CCAGACGATC CTCGATCACA TTCCGCCCCC GTTCGCGCGG
CCCAACCAGC CCTTCCACAT GCTCGTCTCC AACATCGATT GGAGCGACTA CGTGGGCCGA
ATCGCGATCG GCAAGATTCT CGGCGGCAAG ATCTCCGTCG GCGACCCGGT CTTCGTGGTC
CGCAACAGCA CCGGCCAGAA AGCCCGCGCC AAGGTGACGA AGGTTTTCGA GTACTCCGGA
CTCGGCACCA ACGAGGCTTC GATGGCCGTC GCCGGCAACA TCGTCGGGCT GTCCGGCTTC
GAGGACATCG ACATCGGCGA CACCATCGCC GTCAACGAGG AGCAGAAGGC GCTACCGTTC
ACGCAAATCG ATCCGCCTAC GCTGGAGATG CAGTTCTGCG TGAACGACGG TCCGCTCGTC
GGCCAGGACG GCCGGCTCGT CACCTCGCGC CAGCTGCGCG AGCGGCTCTT CCGCGAATTG
AAGACCAACG TGTCCATCTA CGTTGATGAC ACCGACCGGG CTGGCGTCTT CACCGTGAAG
GCACGTGGCG CGATGCAGGT GGCCGTACTC GTCGAGACGA TGCGTCGCGA GGGCTTCGAG
CTTCTGGTCT CGCGGCCGAC CGTCATCGAG CGTCGCGGCC CGAACGGCGA GCGGCTCGAG
CCCTACGAGA CCGTCTGGGT CGAAGTGCCC GACGAATGCG TCGGCGCGAT CATGCAGAAT
CTCGCCAACC GCAAGGGGCA GCTCACGAAC ATGGAGAAGA TGGCGCACTC GACGATGATC
GAGGCGACCA TTACCACCCG CGGATTGATC GGCATGGAGA TCGACGTCGT CAACGCGACG
AGTGGCCGCG GCGTGATGAG CCATCTGTTC AAAGAGTACG GACCCTACGC CGGCGAGGTG
CTCACGCGAT TGACCGGCAC ACTCCTCGCG ACCGAGGCGG GTGAAACGAC ATCGTACGCC
CTCGTGATGG TCCAAGAGCG CGGCAAGCTC TTCGTCGGCC CCGGCGAGCA GGTATACGAA
GGCATGATCG TCGGCGAGAA TCCGCGTAAC GAGGACATCC CCGTCAACGC CGTCCGCGAG
AAGAAGCTCA CCAACTTCCG TTCGCAAGGC GAAGGCGTCG CCGCGGGCCT GACTCCGGCG
ACGAAGCTGT CGCTGGAACG TGCGATCGAA TACATCGCGG CGGACGAATT CGTCGAGGTC
ACGCCGCACC ACCTGCGGCT GCGCAAGCGC ATCCTCAGCC AGACCGATCG CCGCAAAGCC
GAGCGCGCCG CAAAAGCGGA GTAA
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| Protein sequence | MNENIRNIAI IAHVDHGKTT LVDQLLKEGG AFRANQHVDE RAMDSMDLER EKGITIKAKN
TSIHWHDKII NIVDTPGHAD FGGEVERALR MVDGVLLVVD AYDGPQAQTR FVLRKALNHG
LKVVIVINKI DRENAEPAKM YDKVLELLME LNATEEQFDA PVVYGSGRDG YMMKKLDDKR
ENMAPLFQTI LDHIPPPFAR PNQPFHMLVS NIDWSDYVGR IAIGKILGGK ISVGDPVFVV
RNSTGQKARA KVTKVFEYSG LGTNEASMAV AGNIVGLSGF EDIDIGDTIA VNEEQKALPF
TQIDPPTLEM QFCVNDGPLV GQDGRLVTSR QLRERLFREL KTNVSIYVDD TDRAGVFTVK
ARGAMQVAVL VETMRREGFE LLVSRPTVIE RRGPNGERLE PYETVWVEVP DECVGAIMQN
LANRKGQLTN MEKMAHSTMI EATITTRGLI GMEIDVVNAT SGRGVMSHLF KEYGPYAGEV
LTRLTGTLLA TEAGETTSYA LVMVQERGKL FVGPGEQVYE GMIVGENPRN EDIPVNAVRE
KKLTNFRSQG EGVAAGLTPA TKLSLERAIE YIAADEFVEV TPHHLRLRKR ILSQTDRRKA
ERAAKAE
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