| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3340 |
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| Symbol | |
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| ID | 6206254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4365536 |
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| End bp | 4367263 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641693006 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001820218 |
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| Protein GI | 182415152 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.014748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC CTTGCCAAGT TCGCGGCCGC AATCCGAAGG CCTTGTTTTC CCTCAAACTC
CATCGCGGCG ACGGCATGAC GCTGCTGGCG ATGAACTGGC GGCGGCGCCG CCCGCCACTC
GATTTCGTCG GCTTCGCGAT CGAATACCAG GAGCCTGGCG GCACGCGTTT CTACGCGCTG
AACAACCGCC TCAGCTTCGC CGCAGACGCC GCCAAGCCGA AGAAACTCTC CACGCGGCTC
TCGCCGATCC AGAAATTTCG CTGGGTGCAT TTCCCCCGCA ACGCGGAGCT GGACGGCGAT
TTCACCTATC GCGCCACGCC GGTCTTCATG GATGCTGCCG GCAAGCTGAG CTACGGCGAG
CCACAGGAAG CGGCGATCCA GCTCCGCCGT GAGACCTACC CGGGACAGCT CAACGTCACC
TACACGCGCG GCTTCGTCTC GTCGCAGGCG TTCGCCGATC GCTATGGCAA ATATCCGCTC
ACCGCACTGC TGCCTGCCAC GGCCGACCAA GGCCTCGAGT TCCAACCGGG TTGCCCCGAA
AAGGTGGCGA AGGGCGCCTA CGCATGGATG GGTTTTGAAG CGCGTAGCGC CGTGCTTGAG
GTGCTCGACC AGGCGCTCGG CGATCCGCAA GCGCAGGTGC GCGTCGTCGC CTATGACCTT
TGCGAACCCG GCATCGTCTC CCGGCTTGAG CAACTGGGCA CGCGGCTGAA GATCATCATC
GACGACTCAA AACCAGACCA CGGCGCGAAA ACCTCCGCCG AGGCCGCCGC CGAGCGTCGG
CTCATCGCGT CGGCCGGCCC CGATCACGTC AAGCGACAGC ACGTACGAAA GCTTCAGCAC
AACAAGATCG TCGTGGTCGA CGGCCCGGCC GTGCAGGCCG CGGTCGCAGG CTCGACCAAC
TTTTCCTGGC GCGGATTCTA CGTGCAGAAC AACAGCGCGG TGATTCTCCG TGGTCCATCC
GTCGTGCGGA TTTTCACCGC AGCGTTCGAA GCCTACTGGA ACAATGCGCG GCCGGAGGTA
TTCGGCGCGA CCGCCTCCGC CGGCTGGCAG AAGCTGGGGC TCAAAGGTAT TAAGGCCGCC
ATCACCTTCT CGCCGCGGCT TGCGCAAAAC GCGGTGCTCG CCTCAATCGC GGCCGACCTC
GCCCAAGCGC GCTCCAGCCT CTTCTTCTCG CTCGCTTTTC TCTATCAAAC GCCGGGCCGC
ATCGTCGACG CGCTCAAACA AATCCAGTCC GACGCGAAAA TTTTCTGCTA CGGAATCTCG
GACAAGAAAG TGAAAGCGCT CGCCGCGCCC GGCCTCGCGC TCACCAAGCC GAGCGGTCAG
ATGAGCGTCG TTTACCCGCA GGAGCTGACG CGCGATCTGG CCGGCCTGTT CAAGGAGGAG
TCCAGCGGCG GACGCGGCGT GCGGCTGCAC CACAAGTTTC TCGTGATCGA TTTCGATAAG
CCGACGGCAC GCGTCTATGT GGGCTCCTTC AACTTCTCGG GCGCCGCGGA CACTAGCAAC
GGCGAAAACC TGCTGTGCAT TCGCGACCGC CGGGTGGCGA CCTCCTACAT GATCGAGGCG
TTGCGGATCT TCGATCACTA CCATTTCCGC GTCGCGCAAA AAGAGGCCAA GGCGGGACAC
CGCCCGCTGC AGCTCGCCCG TCCGCCGCGC GCACCGGACG AGAAGCCGTG GTGGGACGAA
TACTACTCGG ATCCACGCAA GGCGCTCGAC CGAAAGCTGT TCGCCTGA
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| Protein sequence | MSNPCQVRGR NPKALFSLKL HRGDGMTLLA MNWRRRRPPL DFVGFAIEYQ EPGGTRFYAL
NNRLSFAADA AKPKKLSTRL SPIQKFRWVH FPRNAELDGD FTYRATPVFM DAAGKLSYGE
PQEAAIQLRR ETYPGQLNVT YTRGFVSSQA FADRYGKYPL TALLPATADQ GLEFQPGCPE
KVAKGAYAWM GFEARSAVLE VLDQALGDPQ AQVRVVAYDL CEPGIVSRLE QLGTRLKIII
DDSKPDHGAK TSAEAAAERR LIASAGPDHV KRQHVRKLQH NKIVVVDGPA VQAAVAGSTN
FSWRGFYVQN NSAVILRGPS VVRIFTAAFE AYWNNARPEV FGATASAGWQ KLGLKGIKAA
ITFSPRLAQN AVLASIAADL AQARSSLFFS LAFLYQTPGR IVDALKQIQS DAKIFCYGIS
DKKVKALAAP GLALTKPSGQ MSVVYPQELT RDLAGLFKEE SSGGRGVRLH HKFLVIDFDK
PTARVYVGSF NFSGAADTSN GENLLCIRDR RVATSYMIEA LRIFDHYHFR VAQKEAKAGH
RPLQLARPPR APDEKPWWDE YYSDPRKALD RKLFA
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