Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3324 |
Symbol | |
ID | 6204857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4349211 |
End bp | 4349639 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641692991 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001820203 |
Protein GI | 182415137 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.880505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.62653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAA ATTTCCGACG ACAGCGCACG GCGCATCCGA TCGCCGATCT CAACGTCACG AACCTGATCG ACCTCGGGTT CATGCTGCTG ATCATCTTCA TGATTGCGAC GCCGCTGATG CAGCAGGAGC AGTCGATCGC GGTGAACCTC CCGGCGGAGT CCAAGCGCGC GCAGGAGAAG CCGGACAAGG AGCAGACCTT TCAAGCGATC GCGATCGATC GGCGCGGCAA CTATTTCTTC GGCTCGACGC GCGTGGCCTT TGAGGAACTC GCCCCGCGGC TGGCGGAGCT GGCGCGGCGG CCGAAGCCGC CGGTGATCCG GATTCGCGCG GACCTGACGC TGCAGTGGCA GCAGGTCGTG CGCTTGATGG ACGAGATCAA GAAACACGAG TTGACCAAAA TCACGTTCGA TACCCAGACG GCGGATTGA
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Protein sequence | MARNFRRQRT AHPIADLNVT NLIDLGFMLL IIFMIATPLM QQEQSIAVNL PAESKRAQEK PDKEQTFQAI AIDRRGNYFF GSTRVAFEEL APRLAELARR PKPPVIRIRA DLTLQWQQVV RLMDEIKKHE LTKITFDTQT AD
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