Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3157 |
Symbol | |
ID | 6205378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4107428 |
End bp | 4109662 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641692823 |
Product | TPR repeat-containing protein |
Protein accession | YP_001820037 |
Protein GI | 182414971 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.513945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.746059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGTC CGCTTGATCC CGTCCCGCCG CCGCCGGCAT TCGCGCGCAC GGATCGCCTG GCCGCGGTGC TCGTGGTCGC GGCGACGTTG CTGGCGCATG CGCCGGGGCT GGGCGGCGGA TTCATTTGGA ACGATGCCGA TTACGTGACG GCCCCGGCGC TGCGGTCGTG GGCGGGATTG TGGAGAATCT GGACCGAGAT CGGCGTCACC GAGCAATACT ATCCAGTACT GCACAGCGCG TTTTGGCTGC AGCACCAGCT CTGGGGCGAT CACGCGCTGG GTTATCATCT CCTCAACCTC ATCGCCCACG CGGGCTGTGC GGTGATGTTC GGACTCGTGC TGCGTCGGTT GGCGATACCG GGCGCGTGGA TAGCGGCGAC GCTGTTTGCG CTGCATCCCG TGCACGTCGA GTCGGTCGCG TGGATCTCGG AGCAGAAAAA CACGCTGTCG CTGATGTGCT ATCTGGCCGC GGCGTGGAAG TATCTGGAGT TTGACGAAAC CCGTCGCCGC GGTGCCTACG CGTGGGCGAG CGGCTGGTTC GCCGTAGCGC TGCTGACCAA GACAGTGACC GCGACCTTGC CGGCGGCGCT GCTCGTCGTG GCGTGGTGGC GGCGCGATAG GCTCGAGTGG CGACGCGACG TGCGCCCGCT GCTGCCATGG CTGGTGACGG GAGCGGCGGT CGGCCTGGCG AGCGGATGGA TCGAGCGGCA CGTCGGAGGC GCCGGTGGAG ATGAATTTGC TCTGACGTGG ATCGAGCGGG GGCTGATCGC CGGACGCGCG TTCTGGTTTT ATCTCGGCAG CCTCGTATGG CCCTTCGAAC TCAATTTCAT TTATCCGCGT TGGGTTCCCG ACGTGCGCGT GTGGTGGCAG TGGCTCTATC CACTCGCTGC CTTGGCGCTG TTGGCGGGCT GCTGGGTGAC CCGACGGTGG AGTCGCGGGC CGCTCGCGAG CATCTTGTTT TTCGCCGGCT CGCTGTTCCC GGCGCTCGGG TTCGTGAATC TCTACGGCGC ACGTTACTCG TGGGTCTGGG ATCACTGGCA ATACCTGCCG GATCTCGCTC CGCTGGCGCT ACTGGGCGCG GGCGGGGCGC TCATCGCGCA GCGTGGCGCG GGGCACTGGC GATTCACGGC GTGGAGCGTG TTTGCGATGG TGGTCGCGTT GATGGCAACG CTTACCTGGC AGCACAGCCG AGTTTTTCGC GACGACGAGA CGCTGTTCAC GGCGACACTG CGGCGAAACC CGGCAAGCTG GATGGCGGCG GGGAATCTGG CGGCGCGGCT CGCGAGCGAT CCGGCGCGGC GGGCTGAGGC GATCGGCTAT TTCGAAATGG CGCTGCGGCT GAAGCCCGAT GCGGCGGAAC TGCACGAGGG ACTCGGCTAT CTGCTCGCCC GGGATTCGGC GACACAAGCG CCGGCGCTCG AGCATGCCGA GGCGGCGCTA CGACTGGATT CGGCGCGTGC GTCGGCGCAC AACCTCCGAG GCATGCTGTT GGTGCGGGCA GGAGAAATTG ACGCGGCGAT CGGAGCCTTT CAGCGCGCAC TGAAGTTGGA GCCTAAGCTC GCCGCAGCGG CTGCGAATCT TGGCAGCGCG CTCCTTGCAG CCGGCCGGCC GGCCGAAGCG GTGCCCGTGC TGGAACGCGC GGTTGAGTTC GCGCCGACGC TGGCAGCTGC ACATCTGGCG CTCGGCGATG CACAGCGCGC ACTGGAGCGA ACGGCGGACG CGGAGCGGAG CTACCGGGAG GCGTTGCGAC TCGAACCCGC GGCGCTCGAT GGGCGACTGC GGCTGGCGGA GTTGCTGGCG GAGCAGGGCC GCGACGCCGA GGCGGCGCCG CTGCTGCGCG AGGTGCTCGC GCGCGACGCG GGCTCGGCCG ACGCGCACTA TCAAATCGGA CGGTTGGGAC TGCGCGCCGG CGATACCGCG ATGGGGGTTC ACGCATTGCG GGAAGCCGTG CGGCTGCGGC CGGACTGGCC GGCGGCGCGA CTCACCTTGG GAAACGCGCT GGCGCGAGCT GGCGACATGA CGGGCGCGGT GGAGGAGTTT CGCGCGGCGT TGGCGTTGCG GCCGAACGAT CTCGGCGCGC GCAACAACCT GGCAAACGCG TTGCTCGCCA GCGGCCGGGT GGCGGAAGCG ATTCGTGAGT ACGAAACGGC GCTGCAGCAG CAGCCGGACA ACGCGGATAT CCGCCGAAAC CTGGCGTTCG CCCGCGAGCT TTTGGAACGG GGCACGGGAA ACTAA
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Protein sequence | MNRPLDPVPP PPAFARTDRL AAVLVVAATL LAHAPGLGGG FIWNDADYVT APALRSWAGL WRIWTEIGVT EQYYPVLHSA FWLQHQLWGD HALGYHLLNL IAHAGCAVMF GLVLRRLAIP GAWIAATLFA LHPVHVESVA WISEQKNTLS LMCYLAAAWK YLEFDETRRR GAYAWASGWF AVALLTKTVT ATLPAALLVV AWWRRDRLEW RRDVRPLLPW LVTGAAVGLA SGWIERHVGG AGGDEFALTW IERGLIAGRA FWFYLGSLVW PFELNFIYPR WVPDVRVWWQ WLYPLAALAL LAGCWVTRRW SRGPLASILF FAGSLFPALG FVNLYGARYS WVWDHWQYLP DLAPLALLGA GGALIAQRGA GHWRFTAWSV FAMVVALMAT LTWQHSRVFR DDETLFTATL RRNPASWMAA GNLAARLASD PARRAEAIGY FEMALRLKPD AAELHEGLGY LLARDSATQA PALEHAEAAL RLDSARASAH NLRGMLLVRA GEIDAAIGAF QRALKLEPKL AAAAANLGSA LLAAGRPAEA VPVLERAVEF APTLAAAHLA LGDAQRALER TADAERSYRE ALRLEPAALD GRLRLAELLA EQGRDAEAAP LLREVLARDA GSADAHYQIG RLGLRAGDTA MGVHALREAV RLRPDWPAAR LTLGNALARA GDMTGAVEEF RAALALRPND LGARNNLANA LLASGRVAEA IREYETALQQ QPDNADIRRN LAFARELLER GTGN
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