Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2562 |
Symbol | |
ID | 6205799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3293592 |
End bp | 3295094 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641692223 |
Product | outer membrane efflux protein |
Protein accession | YP_001819444 |
Protein GI | 182414378 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0520371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCT TCACCGCTCG TGTGTTCGCC CTGATCCTCG CCGCTTTCAC CGGCTTCGTT TGCGCCGAGG AGCCCGCCGC TCCGCCGCCG CTCGCCACCG CGCCGACCCT CACCGTCGAG GAATGCATCG TCCGGGCGCT GGAGAAGAAT TTTTCCATCA AGGTGCAGTC GTTCTCCTCC GATGTCGCGC GCGAATCACT CGCTGTCGCC CAGGCGGCAT TCGAGCCCAC GTTCACCGCG AGCCTCGACC GCCGGTTCAC GCAGGACGCG CTCGTCCTCG GCGGCGCGCG CAACGACTAC TCCAGCGCCC GGCTCGGCGT CTCCCAACTC GTCCCCACCG GCGCCCGCCT CAACGTCAGC ACCAATCTCG ATCGCAACGC CGGCAGCTTC ACGTCCGGCA CCGGCCGCTA CACCTCCGGG CCGTTCAATC CGATCTACGG CAACGACGTC GTCCTCACCG TCACGCAGCC GCTGCTTCGC GGCGCCGGAC TCGCGGTCAA CCGCGCCGCC ATCGAGCGCA CCAAACTCGG CGTCGAAATC GCCCACCTCG ATCTGCAGGG CCAGGTGCTC CAGGTGATCC GCGACACCGA AGCCGCCTAC TTCAATTTGG TCTTCGCCCG CGAACAGCTC GCGGTGAAAC AGCACAGCCT GCGGCTGGCC GAACGGCTCT ACGAGGAGAA CAAGACCCGC AAGCTCACCG GCGTCGCGAC GGATCTCGAC GTGCTCACCG CCGAAGTCGG CATCGCCAAC GCGCGCAACG GCGTGGTCGT CGCCGAGCAG GGCGTGCACA ACCGCGAGGA CGAATTGCTC GCGCTGATCG GCCAGTTCGA GTTCGACAGC TCCCTCGGCA CCGTCGGGCT GACGCCGTAT CACGAGCCCA CGCCGTCCTT CGACCTGTCC TACAAGCTCG CGCGCGACAA TCAACCCGAC TTCCTCGCGA CGCAGACCGT CATCCGCCAG CTGGAGATTG ATGCTCGCAA CGCGCGCAAC TCCCGGCTGC CCACCCTCGA TCTCGACGGC GCCGTGGGCT ACAGTGGCGT CGATCGTTCC TATCGGGGCG CGGTCGACCG CACCTCCAAC GGCGAAGCCG AAAACTGGCA GCTCGGCCTT TCGGTCTCCG TGCCTTGGGG GCTGCACGCC GATCGTGCGC GCTATCGCGC CGCGCTCGCG TCGCTCCGTC AGCAGGAAAC GCGGCTGCGC CAGCTCGACC AGAATCTGCT CGTGCAGGTG CGCACCGCCG TGCGCGCCGT CGAAACCAAT CAGCAGAGCG TCGAGATCAA CGCCAAGGCC ACCGAGCTGG CGACGCGCCA ATACGAACTC GAGCTCGCCC GCTTCAAGGC CGGCCTCTCC ACCAGCCGCC AGGTGCTCCA GATCCAGGAC GACCTCGAGA CGACCCGCGT GAACGAGTTG CTCGCGCGCG TCAATCTGCG CATCGCCATC GCGAATCTTC ATCAGCTCGA GGCCAGCTCG CTGCAGCGCT ATCACGTGGC CGTCGGCCAG TAA
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Protein sequence | MSRFTARVFA LILAAFTGFV CAEEPAAPPP LATAPTLTVE ECIVRALEKN FSIKVQSFSS DVARESLAVA QAAFEPTFTA SLDRRFTQDA LVLGGARNDY SSARLGVSQL VPTGARLNVS TNLDRNAGSF TSGTGRYTSG PFNPIYGNDV VLTVTQPLLR GAGLAVNRAA IERTKLGVEI AHLDLQGQVL QVIRDTEAAY FNLVFAREQL AVKQHSLRLA ERLYEENKTR KLTGVATDLD VLTAEVGIAN ARNGVVVAEQ GVHNREDELL ALIGQFEFDS SLGTVGLTPY HEPTPSFDLS YKLARDNQPD FLATQTVIRQ LEIDARNARN SRLPTLDLDG AVGYSGVDRS YRGAVDRTSN GEAENWQLGL SVSVPWGLHA DRARYRAALA SLRQQETRLR QLDQNLLVQV RTAVRAVETN QQSVEINAKA TELATRQYEL ELARFKAGLS TSRQVLQIQD DLETTRVNEL LARVNLRIAI ANLHQLEASS LQRYHVAVGQ
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