| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2355 |
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| Symbol | rplT |
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| ID | 6206639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3045068 |
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| End bp | 3045451 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641692014 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001819237 |
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| Protein GI | 182414171 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.030925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.100889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTG TCACAAACTC CCCCGCGTCG CGCAAGCGCC GCAAGAAAGT GCTGAAATAC
GCCAAGGGCT ATTTCGGCAG CAAATCGAAG CTCTACCGCT ACGCCAAGGA AGCGGTTCAG
CACGCCTGGC AGTACGCCTA CGACCACCGC CGGAAGAAGA AGTCCGACTT CCGCGCGCTC
TGGATCGTCC GGGTGAACGC CGCCTGCCGC AACGCCGGCA TCAGCTACAG CCGCTTCATG
GAAGGCCTCA AGGCCGCGAA TATCGCCCTC GATCGCAAGG TCCTCGCGGA TCTCGCGGTG
CGCGATGAGG CCGGCTTTAA CGTCCTGGTC AAGCAAGCCC AGGACGCGTT GAAGACCAAG
GCCGCTTCCG CGAAGAAGGC CTAA
|
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| Protein sequence | MARVTNSPAS RKRRKKVLKY AKGYFGSKSK LYRYAKEAVQ HAWQYAYDHR RKKKSDFRAL
WIVRVNAACR NAGISYSRFM EGLKAANIAL DRKVLADLAV RDEAGFNVLV KQAQDALKTK
AASAKKA
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