| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2201 |
|---|
| Symbol | |
|---|
| ID | 6207586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2829395 |
|---|
| End bp | 2830411 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691856 |
|---|
| Product | luciferase-like monooxygenase |
|---|
| Protein accession | YP_001819084 |
|---|
| Protein GI | 182414018 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.123209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCT TTTCGGTTCT CGATCTCTCG CCTATCGTTC AGGGCGGCAC GGTGGCGGAC
GCACTACAGC GCTCGCGCGA ACTGGCGCAG GCCGCCGAGA GGCTTGGCTA TCGGCGGTTC
TGGCTGGCGG AGCATCACGG CATGCCCGGC ATCGCCAGCG CGGCGACCGC CGTGGTGATC
GGGCACGTGG CCGCTGGCAC GTCGACGATT CGCGTCGGCT CCGGCGGGAT CATGCTGCCG
AACCACGCGC CGCTGGTGAT CGCCGAACAG TTCGGCACGC TGGAATCACT GTTTCCCGGT
CGGATCGATC TTGGGCTCGG CCGTGCGCCG GGCACGGATC CTGTCACGGC GCATGCGCTG
CGTCGCGGTC GGTCAAACAG CGCGGACACG TTCCCGCAGG ACGTAGTGGA ACTGCAGGCT
TACTTCCGCG GCGGGGCCGG TCAGCCGGTG AGGGCGGTGC CGGGAGCCGG ACTGTCGATT
CCGATCTGGC TGCTTGGTTC GAGCCTGTTC AGCGCGCGAC TCGCGGCGGC GCTGGGGCTG
CCGTTCGCGT TCGCCGCGCA TTTCGCGCCC GATCTGCTCG ACGAGGCACT GGGCATTTAC
CGTGAGGAGT TCAAGCGTTC GGAAACGCTC GCGCGACCCT ACGCGATGGC GGCGATCCAG
ATCTACGCGG CGGAAACTGA CGCAGCGGCG GCGCGGTTGT TCACGTCGCT GCAGCAGAGT
TTCCTGCAAC TGCGGCGCGG CGCGCCCGGT CCGCTGCCTC CGCCCGTCGA CGGCATGGAC
GGACTCTGGA CGCCGCTGGA ACGCGTCGGC GTGATGAGCG CGTTTCACGA GGCGGTGATC
GGATCGCCGG CGACAGTGGA GCAGGGCATC CGGGCATTTC TCGACCGAAC GCGCGTCGAC
GAGTTGATGA TCACCGGCGC GATTTACGAC GCCGCTGCGC GGGTGCGCTC GCTCGAGCTC
ACCGCGGAGG TGCGCGAGCG GCTTGCCGCT TCCGGAACGG ATCGACGAAT CGGGTAA
|
|---|
| Protein sequence | MIPFSVLDLS PIVQGGTVAD ALQRSRELAQ AAERLGYRRF WLAEHHGMPG IASAATAVVI
GHVAAGTSTI RVGSGGIMLP NHAPLVIAEQ FGTLESLFPG RIDLGLGRAP GTDPVTAHAL
RRGRSNSADT FPQDVVELQA YFRGGAGQPV RAVPGAGLSI PIWLLGSSLF SARLAAALGL
PFAFAAHFAP DLLDEALGIY REEFKRSETL ARPYAMAAIQ IYAAETDAAA ARLFTSLQQS
FLQLRRGAPG PLPPPVDGMD GLWTPLERVG VMSAFHEAVI GSPATVEQGI RAFLDRTRVD
ELMITGAIYD AAARVRSLEL TAEVRERLAA SGTDRRIG
|
|---|
| |