| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2077 |
|---|
| Symbol | |
|---|
| ID | 6204860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2665882 |
|---|
| End bp | 2666772 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641691728 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_001818960 |
|---|
| Protein GI | 182413894 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0831544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.489667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTT CCGTACTGGT CTCGATCCTC GCCGCCTGGG GCGTCGTCGT GCTGGCGGGC
TGCGGCCGCA GCGAAACCGC GGCGCAGGCG AAACCGGAAC CTGGATATCC GCTCACGGGC
GAAATCGTGG AGGTGAACCC GGCGGAAAAC GTGTTGGTGG TGCGGCACGA CGACATCCCC
GGCCTGATGC CCGCGATGAC GATGGAGTTC ACTGCTACGC CAGGCGATGT GGCGCTGGCG
AAACCGGGCC AGAAGATTCG CGCGCGTTTG ATCAAAGCCG GCGAGGGCGA CTGGCGGCTC
GAACGGATCT GGCCGATGGA TCCGGCGCAG GTGAAGGAGA TTGAGGCGCG GGCGAACGCG
CTGCGGCAGG AAACCCTCGC CCGCGGTCGC GGCGTGTACC GCGAGATCGG CGAGAAGATG
CCCGAGTTCG CGCTTTACGA TCAGGAGGGG CGGGTGGTGC AAAGCGGCCG GTTCGCCGGC
AAGCAGGTCA TGCTGAACTT CATCTTCACG CGCTGCCCGG TGGCGACGAT GTGCCCCGCT
TCCACGGCGA AGATGGGCAT CGCCCAAAAG CTCGCGCGCG AAGCCGGCGT GACCAACCTT
GAGCTCGTCT CGATCACCTT GGACCCGGCT TACGACACGC CGGGCGTGTT GAAGGAATAC
GCCACCACGC GTGGCATCGA TACCAGCAAC TTCTCATTCC TGACCGGACC GGAGAACGCA
GTGCGCGATC TGCTCGCGCA ATTCGGCGTC CTGGCCGAGC CCGACAAGGA CGATTTGGTG
AAACACACGC TCGCGACGAT CCTGATCGAC GAGAAAGGCC GGATCGTGCA CCGCACCGAC
GGCAGCTCGT GGGACCCGAA GGAGTTCGTG CCGAAAATGA AACGGGGATG A
|
|---|
| Protein sequence | MRRSVLVSIL AAWGVVVLAG CGRSETAAQA KPEPGYPLTG EIVEVNPAEN VLVVRHDDIP
GLMPAMTMEF TATPGDVALA KPGQKIRARL IKAGEGDWRL ERIWPMDPAQ VKEIEARANA
LRQETLARGR GVYREIGEKM PEFALYDQEG RVVQSGRFAG KQVMLNFIFT RCPVATMCPA
STAKMGIAQK LAREAGVTNL ELVSITLDPA YDTPGVLKEY ATTRGIDTSN FSFLTGPENA
VRDLLAQFGV LAEPDKDDLV KHTLATILID EKGRIVHRTD GSSWDPKEFV PKMKRG
|
|---|
| |