Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1896 |
Symbol | |
ID | 6205283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2375827 |
End bp | 2378259 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641691544 |
Product | permease |
Protein accession | YP_001818779 |
Protein GI | 182413713 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCCC TCCGCTACGC TTTTCGCTCG CTCGCGAAAT CGCCCGGCTA CACCGCCATC GCGCTCGTCA CCCTCGCGCT CGGCATCGGC GTCAACACGT CGATGTTCAG CATCATCGAC GCCCTGCTCT TCCGCGCCGC GCCGTATGCG GAGCCCGAAA AGCTCGTGCA GCTCACCGGG CAACTCCAAT CCGGTCCGCT CTTCTTCGGC CGTTTCTCCG CCCAGGAGGT CCGCGAGATC GCACCGCAGG CGACCGGCTT CGCCGCGCTG ACCGCCTACG ACCGCACGAT GGCCACGCTC GCCGCTCCGG GCCAGCCGGC CGAGCGACTG CTCGCGATCC GTTTCACCCG TGGCGCGTTC GAGACCTTGC GCGTCGCGCC GCTCCTCGGC CGCACGTTCA CCGCCGAGGA ATTCCAGCCC GGTCGTGATC AGGTCGCGAT GCTCACCGAG TCGGCCTGGC GCGCGCGCTT CGCCGCCGAT CCTGCGATCA TCGGTCGCAC GCTTCGGCTC GACGGCGAGA TCGTCACGAT CGTGGGCGTG CTGCCAGCCC GCGCCGAGTA TCGAGTCTAT TGGGGCGGAG CCAGCTTGTG GCGGCCGCTC AACTTCACGC CCGACCAGCT GAACTTTCGC GGCTACCGGC AGTTTTGGGT GATCGGCCGG CTCCAGCCCG ACGTCACGCC CGCCGCGATC GAAGCGCAGC TCGCCCCGCT CGCGGCCCGA CAGACGCAGG AGTTTCCCCG CGACTATCCG GGTCTTCACT ACGAGGCGGC GCCCCTGAAC GAGCGCGTGC TCGACAACGT CCGGCGCAAT ATGTCGTGGA TGCTGCTCGG GCTCGCTGGC TTCGTGCTGC TGATCGGCTG CGCCAATCTC GCCAATCTCC AACTCGCCCG CGCGACCGGC TCCGTGCGCG ACTTCGCGAT TCGCGCCGCG CTCGGCGCCT CGCGGCGGCA CCTCATCGCG CAACAGCTCA CCGAATCGCT GCTGCTCTCG CTCGCGGGCG GCGCGCTCGG GCTGCTGCTG GCCGGCTGGC TCAACACGCT CGCCGAACAC GCGCTGCTCG TCGACGGCGC GCCCGGGTTC ACCGTCGACA TCGACGCCCG TATCCTGGCG CTCACGCTGC TGATTTCGGT TTTCACCGGC GTGCTCTTCG GTCTCGTGCC CGCGCTGATC GCTTCGCGGC CCAACGTCGT GGCGACCTTG AAGGCGCAAG GGCGCGGCTC AACCGGCACC CGCAGCCAGC AGCGACTGCG TCATGCGCTC ATCATCGGCG AGGTCACGCT CGCGCTGGTC CTGCTTGCCG GCGCCGCGAT CATCAACCGC GGACTCGCCC GGATGCTCGC GCGCGAAAGC GGCTGGGACA CCGGGCGCGT GCTCACCGCG ATCCTGCCGA TTCCCGAAAC TCGCTACCCG ACCGCCGCGC GTCGCGTGGA GTTTTTCCAT CAGCTGGAGG AAAAGCTCGC CGCCATCCCC GGCGTCGAGC ACGCCGCCCT GGCCACGTCG CTCCCATTGC TCGTCGACGG CACCACGCGA CAGGTGTTCG TCGACGCCCC GGCGGCCGAT GGCAGCGCCG CCGGCATCGT GGCGGTCCAT CAGATGGTCA CCTCCGACTA TTTCTCGGCC ATGGGGATCC GGCTGCTCGA GGGCCACGCG TTTCCGCGGG ATCTTCAGCC CGATGGTCCG GCCTACATCC TCGTCAACGA AACGCTCGCG CGTCATTTCT GGCCCAACGA GAGCGCCGTG GGCAAACGCC TCGGCAGCGT GCAGGAGGGC CAGCCGGTGT GGCGCGAAGT GATCGGCGTC GTGCGCGACG TGGAGCCGGT CGCGAGCGCG GAGAACCCAA CCACCCGGCT CACCGTCTAC CGGCCGCTCG TGCAGGAGCC GTGGTCCTAC GTCAACGTCG TGCTGCGCGC CGCTCCAGGC ATCGGGGCGG TCGAAACCCT GGCCGAGCCG CTGCGGCGCG CGATCGCCGC GCAGGATCCC GATCTCGCCG CGGATTTCGT CGTCAGCGTC CGCACCTACG TCGCCGCCGC GCAAAGCAAC ATGATCCTCG TCGGCCGGCT GCTCATCGGG TTCGCCGTGC TTGGGCTCGT GCTCGCCGCG GTCGGACTCT ACGGCGTCAT CTCCCACACC GTCGCGCAAC GGCTGCCCGA ATTCGGCATC CGACTCGCGC TCGGGGCGCT GCCACGCGAC CTGCTCCGTC AGGTGCTGAT CCGCGGTGTG CGACTGACGA CCTTCGGTCT GGCGCTTGGG CTCGTCGGCG CACTCGTGCT CGGCCGCCTG CTCGGCTCGA TCATGCCCCG GCTCGCGCGA CCTGATCCGC TCGGCTTGGC GGGAGTCGTC TTGCTCCTGT TGGTCGTGAC GGTCGTCGCC TGCTGGTTCC CGGCGCAGCG CGCCATGCGC GCCAATCCGC TCGATGCGCT CCGCGCCGAA TAG
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Protein sequence | MFPLRYAFRS LAKSPGYTAI ALVTLALGIG VNTSMFSIID ALLFRAAPYA EPEKLVQLTG QLQSGPLFFG RFSAQEVREI APQATGFAAL TAYDRTMATL AAPGQPAERL LAIRFTRGAF ETLRVAPLLG RTFTAEEFQP GRDQVAMLTE SAWRARFAAD PAIIGRTLRL DGEIVTIVGV LPARAEYRVY WGGASLWRPL NFTPDQLNFR GYRQFWVIGR LQPDVTPAAI EAQLAPLAAR QTQEFPRDYP GLHYEAAPLN ERVLDNVRRN MSWMLLGLAG FVLLIGCANL ANLQLARATG SVRDFAIRAA LGASRRHLIA QQLTESLLLS LAGGALGLLL AGWLNTLAEH ALLVDGAPGF TVDIDARILA LTLLISVFTG VLFGLVPALI ASRPNVVATL KAQGRGSTGT RSQQRLRHAL IIGEVTLALV LLAGAAIINR GLARMLARES GWDTGRVLTA ILPIPETRYP TAARRVEFFH QLEEKLAAIP GVEHAALATS LPLLVDGTTR QVFVDAPAAD GSAAGIVAVH QMVTSDYFSA MGIRLLEGHA FPRDLQPDGP AYILVNETLA RHFWPNESAV GKRLGSVQEG QPVWREVIGV VRDVEPVASA ENPTTRLTVY RPLVQEPWSY VNVVLRAAPG IGAVETLAEP LRRAIAAQDP DLAADFVVSV RTYVAAAQSN MILVGRLLIG FAVLGLVLAA VGLYGVISHT VAQRLPEFGI RLALGALPRD LLRQVLIRGV RLTTFGLALG LVGALVLGRL LGSIMPRLAR PDPLGLAGVV LLLLVVTVVA CWFPAQRAMR ANPLDALRAE
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