| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1677 |
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| Symbol | |
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| ID | 6207684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2057125 |
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| End bp | 2060139 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641691324 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001818561 |
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| Protein GI | 182413495 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.243336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.336231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGT TCCTCATCAA ACGTTTTTCC GGTCGGCACT ACCGCAAGTT CCTCGAATCG
TGCCGGCCGA TCGTGGCCCG CATTAACGAA CTGGAAACGT CCTATCAGTC GCTCAGCGAT
GAGCAGTTGC GCGCGAAGAC CGATGATTTC CGCGCCCGGC TCGCGGCAGC GACCGACAAA
CGTGCGGCTC TCGAGCAGGT CCTGCCCGAA GCTTTTGCGA CCGTAAAAAA CGCCGCCCGC
CGTCTCTTGG GCCGGACCAT CGTCGTGTGC GAACATGAGC TGGTCTGGGA TATGGTCCAC
TTTGATGTCC AGTTGATCGG CGGCATCGCG CTGCACCAAG GCAAGATTGC GGAAATGGCG
ACCGGCGAAG GCAAGACGCT CGTTGCGACG CTCCCGTTGT ACCTGAACGC ACTCGTCGGC
CGGAACTCGC AACTCGTCAC CGTCAACGAC TATCTCGCCC GGCGCGACTC GGAGTGGATG
GGATACATCT ACAACTTCCT CGGCATCACC GTCGGTTGTA TTCAGCAGCA GATGCCGCCG
GATCTGCGGC GGGAGATGTA CAACCGAGAC ATTACCTACG GCACGGCCAG CGAGTTCGGC
TTTGATTACC TGCGCGACAA CGGCATGGCC ACGCGCAAGG AGGACCAGGT GCAGCGCGAC
CATTGGTACT GCATCGTCGA TGAAATCGAC TCGATCCTCG TCGACGAAGC ACGGACGCCG
CTGATCATCT CCGGCCCGGC GCCGATCGAG CGCGAGCAAC CGTTCACGCG GCTGCTGCCG
CCAGTCAATG ATCTGGTCAA CGCGCAGGTG CGGCTTTGCA ACAAGATCGT CACCGAGGCG
CGCGAACTAC TCGAAAAAGC GGACGCCAAA CCCGAACAGA AACAGCTGGC CGCTCGCAAG
CTGCTCCAGG TGAAAATGGG GCACCCCAAG AACAAGCAGT TGCTGCGGGT CATGGAAACG
CCCGAATGGC GCAAGCTGCT CGATAAGGTG GAAACCGAGA TGAACTCGGA CCTGAACAAG
GAGGAACTCT ATCGTATCAA GGAGGAGCTT TTCTTTGTCA TCGATGAGCG CCAGCACCAG
GCCGACCTGA CGGAGATCGG CCGCACCAAG CTTCGCCCTG ACAATCCGGA TGCGTTCGTC
CTGCCTGACC TGGCGACGGA GTTCAGCGAA CTCGATAAGA ACGCGGCGAT GACGCCGGAG
GAGCGGGAGG CGCAGAAGCT CACGTCGCAG CAGCGTTATG CCGACGTGTC GGAGGATATT
CACGCGATTT CACAGCTGCT CCGGGCGTAT TCGCTGTACG AACGCGACGT GGAGTACGTC
GTGCAGGAAG GCAAGGTGAT GATCGTCGAC GAGAACACCG GCCGTGTGAT GCCGGGCCGA
CGCTGGTCGG ACGGTCTGCA TCAGGCGGTC GAGGCGAAGG AAGGCGTGAC CATCGAGCGC
GAGACACGCA CCTACGCGAC GATCACGATC CAAAATTACT TCCGCATGTA TGAGAAACTT
GCGGGCATGA CGGGCACGGC GGAGACGGAA GCGACCGAGT TCAATGACAT CTATCGGCTG
GCAGTGCAGG TGATCCCGAC CAACAAGCCC TGTATCCGCG TCGACAAGAA CGACTCGATC
TTCAAGACCC GCCGCGACAA ATACGCTGCG GTCGTGCGCG AGATCGAAGG GGCGAACAAG
CGCGGCCAGC CGGTGTTGGT CGGCACCGTG TCGGTCGAAT CGTCGGAGGT GCTTTCCCGC
ATGCTCAAGC GCGCGGGGAT CATCCATACC GTGCTGAACG CGAAATTCCA CGCGCAGGAA
GCGGACATCG TCGCCCGCGC GGGCCAACGC GGCGCGGTGA CGATCGCAAC CAACATGGCC
GGCCGCGGCA CGGACATCAA ACTGGGCGAG GGCGTGCGCG ACCTCGGCGG CTTGTATGTC
GTCGGCACCG AGCGGCACGA GTCCCGGCGC ATCGATCGCC AGCTGCGGGG CCGCTGCTCC
CGCCAAGGCG ACCCGGGCAT GACGAAGTTT TTTCTCTCGC TCGAGGACGA CCTGATGCGG
CTGTTCCTGC AGGGTAATCT CGCCTCGCGT TTGATGGAGG GATCGATGCA GGAAGGCGAG
GAACTCGAGC ATCCCTGGCT CAACCGCTCG ATCGAATCGG CCCAGAAAAA GGTCGAGCAG
CAGAACTACT CAATCCGTAA GCGGCTGCTC CAGTACGACG ACGTGCTGAA TCAACAGCGC
GAGGTCATCT ACGGAATCCG CAATGCGGCG ATCCACGCGG ACCGCCCGAA GGACATTATT
TTCGAGCAGA TCGAGGAAGA GTTGATCAAC CGCCTGGAAG CGGTCGGGCT CGACGATCGC
GCCGGACCTT CCAAGGCGGC CCTGGAAAGC TTCGTCGGCT GGGCCAACTC GCATTTCCCC
ATCAGCCTGC GCGTGGAGGA GGTGACCGGG ACGGTGGAGG GGCTGGCCGC CCTGTTGCTG
GAACGGATCA AAAAGGCTTA CGCGGTGAAG GAGTCGGTCG AGATCCCGGA TGCGCTGGGC
GCGCTCGAGC GCTACGTCGT GATTAACGCG ATCGACCATC ACTGGCAGGA ACACCTGACG
GAGATGGAGG ACCTGCGGAA GAGCATTGGC CTGCGCAGCT ACGGCCAGAA GGATCCATTG
GTCGAATACA AGAGCGAGGC CTACCGCTAC TTTGAGGAGC TGATGAACAA CGTCCGCCTG
CAGATCTGCA CGGGACTGTT CCGCAGCGCC TCCAATCTGG AATCCTTCGA AAACATGCTC
GCGCTGCTGA GTCGGACCGC GCGCGCGGTC GGGCCGTCGG ATGTGCCAAC ACCGGCTGCG
CCTGGCACGG TAGCAACGTC GGTGCGACCG GCGATGGCCG GTCGAAGCGA AGCGGCCGCA
ACGGCCACGG CCGAGCCCGA ACAGGAGATT CAGCTGCCCA AGGTGACGAT CCGACGAGAG
ACGCCGAAGG TCGGCCGCAA CGATCCGTGT CCGTGCGGCA GCGGGAAGAA ATACAAGAAC
TGCCACGGCC GCTGA
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| Protein sequence | MLSFLIKRFS GRHYRKFLES CRPIVARINE LETSYQSLSD EQLRAKTDDF RARLAAATDK
RAALEQVLPE AFATVKNAAR RLLGRTIVVC EHELVWDMVH FDVQLIGGIA LHQGKIAEMA
TGEGKTLVAT LPLYLNALVG RNSQLVTVND YLARRDSEWM GYIYNFLGIT VGCIQQQMPP
DLRREMYNRD ITYGTASEFG FDYLRDNGMA TRKEDQVQRD HWYCIVDEID SILVDEARTP
LIISGPAPIE REQPFTRLLP PVNDLVNAQV RLCNKIVTEA RELLEKADAK PEQKQLAARK
LLQVKMGHPK NKQLLRVMET PEWRKLLDKV ETEMNSDLNK EELYRIKEEL FFVIDERQHQ
ADLTEIGRTK LRPDNPDAFV LPDLATEFSE LDKNAAMTPE EREAQKLTSQ QRYADVSEDI
HAISQLLRAY SLYERDVEYV VQEGKVMIVD ENTGRVMPGR RWSDGLHQAV EAKEGVTIER
ETRTYATITI QNYFRMYEKL AGMTGTAETE ATEFNDIYRL AVQVIPTNKP CIRVDKNDSI
FKTRRDKYAA VVREIEGANK RGQPVLVGTV SVESSEVLSR MLKRAGIIHT VLNAKFHAQE
ADIVARAGQR GAVTIATNMA GRGTDIKLGE GVRDLGGLYV VGTERHESRR IDRQLRGRCS
RQGDPGMTKF FLSLEDDLMR LFLQGNLASR LMEGSMQEGE ELEHPWLNRS IESAQKKVEQ
QNYSIRKRLL QYDDVLNQQR EVIYGIRNAA IHADRPKDII FEQIEEELIN RLEAVGLDDR
AGPSKAALES FVGWANSHFP ISLRVEEVTG TVEGLAALLL ERIKKAYAVK ESVEIPDALG
ALERYVVINA IDHHWQEHLT EMEDLRKSIG LRSYGQKDPL VEYKSEAYRY FEELMNNVRL
QICTGLFRSA SNLESFENML ALLSRTARAV GPSDVPTPAA PGTVATSVRP AMAGRSEAAA
TATAEPEQEI QLPKVTIRRE TPKVGRNDPC PCGSGKKYKN CHGR
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