Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1513 |
Symbol | |
ID | 6204805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1876333 |
End bp | 1877490 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691154 |
Product | hypothetical protein |
Protein accession | YP_001818397 |
Protein GI | 182413331 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.569001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTTT TCTCCCTCGT TGCGAGCAAC CTAAAGCGGA AAAAGGTCCG CACGCTGCTC ACGATCCTTT CGATCTTCGT CGCGTTCTTC CTCTTCGGCC TGCTCTGCGC ACTGAAGAAG GCGCTCGACG GCGGCGTGAG CGTCGCCGGT GCCGACCGGC TCATCACGCG CCACAAGGTT TCCATCATCC AGATGATGCC GGTCAGCTAC CGCAACCGCA TCGCCTCGAT GCCCGGCGTC TCCGGCATCG CCTCGCAATC GTGGTTCGGC GGAATCTATC AGGACCCGAG CAACTTTTTC GCGACGCTCG CCGTGGATCC GGAGCCGTTC CTCGAGCTGT ATCCCGAGTT CGTGCTGCCA GCGGATCAGA AAGCCACCTG GCTCAAGACC CGCACCGGCG CGATCGTCGG CCGCGCCACG GCCGAGCGGT TCAAGTGGAA AGTAGGCGAC CGCATCCCGC TGCAGTCACC CATCTGGCAG CGCGAGGACG GCGGTCACGC GTGGGAATTC GATCTCGTCG GTATTTACGA CGCCGGCAAA AAGGGCACCG ACACGACCCA GTTCTTCCTC CACTACGACT ATTACGACGA AGGCCGCGCT TTCGCGAAAG GCCAGATCGG TTGGTTCACG GTGCGCATCG CCGATCCCGC GCAGGCCGCC CAGATCGCCG CGCGGATCGA CCGCGAATTC GCCAACTCGC CCACCGAAAC CAAGACCGAG CCGGAGGGCG CGTTCGCGGC CGGGTTCGCC CAGCAGGTCG GCGACATCGG GCTGATCGTC ACCGGCATCA TGAGCGCGGT GTTCTTCACC ATCCTGCTCG TCGCCGGCAA CACGATCGCC CAAGGTGTGC GCGAACGCGT TGAGGAGATC GGCGTGCTGA AGGCGGTCGG CTTTCCCAAC GGACTCGTGC TCGGGCTCGT GCTCGCGGAA TCCTGCCTGA TCGCCGCGCT CGGCGGGTTG GTTGGACTCG GGCTCGCCTG GCTCGCGACG ATGGGCGGCA GCCCGGTGCC CGGCCTGCTG CCGGTGTTCT TCATTCCCTC GAAGGACATC CTGCTCGGGA TCGTCCTGGT CCTTGCCTTG GGGCTGCTCA CCGGCCTGCT GCCCGCACTG CAGGCCATGC GGCTCGGCGT GGCCGACGCG CTCCGCCGGC AAACGTGA
|
Protein sequence | MKFFSLVASN LKRKKVRTLL TILSIFVAFF LFGLLCALKK ALDGGVSVAG ADRLITRHKV SIIQMMPVSY RNRIASMPGV SGIASQSWFG GIYQDPSNFF ATLAVDPEPF LELYPEFVLP ADQKATWLKT RTGAIVGRAT AERFKWKVGD RIPLQSPIWQ REDGGHAWEF DLVGIYDAGK KGTDTTQFFL HYDYYDEGRA FAKGQIGWFT VRIADPAQAA QIAARIDREF ANSPTETKTE PEGAFAAGFA QQVGDIGLIV TGIMSAVFFT ILLVAGNTIA QGVRERVEEI GVLKAVGFPN GLVLGLVLAE SCLIAALGGL VGLGLAWLAT MGGSPVPGLL PVFFIPSKDI LLGIVLVLAL GLLTGLLPAL QAMRLGVADA LRRQT
|
| |