| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1303 |
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| Symbol | |
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| ID | 6204716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1614478 |
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| End bp | 1616667 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690944 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001818188 |
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| Protein GI | 182413122 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.851428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACC ACTACGTCAG CTATCTTTGG GATGACACCG TCGCCGCGTC GCTCGATCCG
GTCGCCCGGC TCGTTTACCG CTCCAATCTT CTCGGCTCGG ACCAGCGGAT CACCAACACC
GGTGGCGGCA ACACCTCGTC CAAACTCACC GAGCGCGACC CGCTGACCGG CGCACCGGTG
GAGGTGCTTT GGGTGAAAGG CTCCGGCGGC GACCTCCGCA CGAGCAAGCG CGAGAATTTC
GCGTCGCTGT ATCAACCGAA GCTGCTCGAC CTGCAGCGGC TCTACGCGAC GCGGGCGGAC
AAGGGGCTGA AGTCGTCCGC CGAGGACGAC ATGGTCGGCA TGTATACGCA CGCGACGTTC
AACCTGAATC CGCGTGCCTC CTCGATTGAC ACGCCGCTGC ATGCGTTCCT GCCCGGGCGG
CATGTGGACC ACATGCATCC GAATGCGATC ATCGCGATCG CCGCGTCAGC GAATTGCGAG
CGGCTCACGC GCGAGATCTT CGGCGACGCA ATGGCCTACG TGCCGTGGAT GCGGCCGGGC
TTCGAGCTCG GGCTCGCGAT GCAGGAAATC GTCCGTCGTC AGCCCGGCGT TCGGGCGATC
ATGATGGGCC AGCACGGTTT CATCGCGTGG GACGACGACG ACAAGGCGTG CTACACCCGC
ACCCTCGACT TCATTGAACG CGCCGCCACC TACATCGAAG AGCGCTACGC GGCGCGCGGC
GGCGACGCGG CGGCCTTCGG CGGCGCGAAA TACCAGACGC TCGACGAGCC CCGCCGCCGC
GCGACGCTCG CGGCCGTGCT CCCGTGGCTG CGCGGCCAGG TGTCGCGCGA ACGGCGGTTT
GTCGGCACGA TTCAGGATGA CACGCCGATC CTGCGCTTCG TGAACTCGCA CGACGCGCCG
CGGCTCGCCG AGCTCGGCAC GTCCTGCCCG GATCATTTTT TGCGGACGAA GATCAAGCCG
CTTTACGTCG ACTGGAATCC GCAGAGCGAG GACCTCGCTG CGTTGAAGGG CAAACTCGCC
GCCGGGCTCG AGCAGTATCG CCGCGACTAC GCCGCCTACT ACGATCGCTG CAAGCACGCC
AACTCGCCCG CGATGCGCGA CCCCAATCCT ACCGTCGTGC TCATTCCCGG GCTCGGGATG
ATCGCGTGGG GGAAGGACAA ATCCGAGTCG CGCGTCACCG CGGAGTTCTA CAATTGCGCG
GTCGAGGTCA TGCGCGGTGC CGAGGCGATT GACCGCTACG TGGCGTTGCC GCAGCAGGAG
GCGTTCGACA TCGAGTACTG GCTGCTCGAG GAGGCGAAGT TGAAGCGCAT GCCCGCCGAA
AAGGAACTCG CGCGCCAGAT CGCCGTCGTG ATCGGCGCCG GCTCCGGCAT CGGCAGGGAG
ACGGCGCACC GGCTCGCGCG CGAAGGCGCC CAGCTCGTCT GCGTCGATCT GATGGAGGGC
GCCGCGCAGT CGACGGCAAA GGAAATTACG GATCGGCTCG GACTCGGGAT CGGCGTCGCC
GGCTCGGGTA TATCCAACTG CGGTCCGGCG CTCGGACTTG GCGCCAACAT CACCGACCGT
GCTTCGATCC GCCACATGCT CGATCAGGTG GCACTCGCCT ACGGCGGATT CGACGCGATC
GTCGTCACCG CCGGGGTGTT CGTGCCGAGC GACACGACCG GGCACATCCC GGATGAGAAA
TGGGCGCTCA CGTTCAACAT TAACGTGACC GGCAGCTATC TCGTCGCGGA CGAGGCGGCG
AAGACCTGGC GCGATCAGGG GCTGCGCGGC AGCCTCGTGC TCACGACGTC GGCGAATGCC
GTCGTCGCGA AGAAAGGCTC CGTCGCCTAC GACACCTCGA AGGCGGCCGC CAGTCACCTC
GTGCGCGAGC TCGCGATCGA GCTTGCTCCG CTGGTTCGCG TGAATGGCGT GGCTCCGGCC
ACCGTGGTGC AGGGCTCGGC CATGTTTCCC CGCGACCGCG TCATCGGTTC GCTCGCGAAA
TACAACATCG CGTTCGCCGC CGATGAACCG ACCGATTCGC TCGTGCGCAA GCTCGCGCAG
TTCTATGCCG ATCGGACGTT GACGAAAGCG CCGATCACGC CCGGGGACCA GGCGGAGGCG
TATTTCCTCC TCGTCTCGTC GCGATTGGCG AAGACCACGG GCCAGATCCT CACCGTCGAC
GGCGGCCTAC ACGAAGCCTT CCTCCGCTAG
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| Protein sequence | MSYHYVSYLW DDTVAASLDP VARLVYRSNL LGSDQRITNT GGGNTSSKLT ERDPLTGAPV
EVLWVKGSGG DLRTSKRENF ASLYQPKLLD LQRLYATRAD KGLKSSAEDD MVGMYTHATF
NLNPRASSID TPLHAFLPGR HVDHMHPNAI IAIAASANCE RLTREIFGDA MAYVPWMRPG
FELGLAMQEI VRRQPGVRAI MMGQHGFIAW DDDDKACYTR TLDFIERAAT YIEERYAARG
GDAAAFGGAK YQTLDEPRRR ATLAAVLPWL RGQVSRERRF VGTIQDDTPI LRFVNSHDAP
RLAELGTSCP DHFLRTKIKP LYVDWNPQSE DLAALKGKLA AGLEQYRRDY AAYYDRCKHA
NSPAMRDPNP TVVLIPGLGM IAWGKDKSES RVTAEFYNCA VEVMRGAEAI DRYVALPQQE
AFDIEYWLLE EAKLKRMPAE KELARQIAVV IGAGSGIGRE TAHRLAREGA QLVCVDLMEG
AAQSTAKEIT DRLGLGIGVA GSGISNCGPA LGLGANITDR ASIRHMLDQV ALAYGGFDAI
VVTAGVFVPS DTTGHIPDEK WALTFNINVT GSYLVADEAA KTWRDQGLRG SLVLTTSANA
VVAKKGSVAY DTSKAAASHL VRELAIELAP LVRVNGVAPA TVVQGSAMFP RDRVIGSLAK
YNIAFAADEP TDSLVRKLAQ FYADRTLTKA PITPGDQAEA YFLLVSSRLA KTTGQILTVD
GGLHEAFLR
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