Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1210 |
Symbol | |
ID | 6205007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1505498 |
End bp | 1506217 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690852 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001818096 |
Protein GI | 182413030 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.27359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCTA CTACTTCGCT CCGCATCGTC GTCCTCAAAT GGGACCGGCT CTACGGCGAT CTCATCCGGC GCCAGATTTG GGACGTCTGG CCCAACGCGG TGGTGCAGGT GTTTCAGCGC GGGCTGGCGG CGCTGGATGC CATCCAGGAG GCGACGCCAA ATCTGTTCAT CGCCGGCGTC AAGATCGAGG ACATGGACGG ATTGGAGCAT CTGGAGCCGT TCACCCAAAC CGAACTGCCA ATCCTGATCG TCACCTCCCG GGCCGATGCC CGCACCTTCA AGATGCTCCG TCACGTCCGT TACGACGGAA TCTACGATGG GTCCTCGGAA GGACTGGAGC ATCTCGCCCC AGCGCTGCGC CAGGCCATGC AGCACCGGCT TTACGTCAGC CCGGCTCTGC TCCCTTTTCT GCAGGAGCGT AGGAGCACCA CGTTGGACGC GCTGACTGAA CGGGAGCAGA TCGTGCTCTC GGTCATCGGC GACGGTTCCG ACAACGCCCA AGCCAGCGAA CGGCTCGGCA TTTCCGCGAA AACCGTGGGG ACGCATCGCG AGGCAATCAT GCGCAAGCTC GGGTTGCATC AGATCGGGCA GCTCATGCTG TATGCGCTGC AAAATGGCTA CGTGCTGGTG ACCGCGAAGG GTGTTTTCTA CCCGGGGTTT CAGCGTCGCT TTTGCCACGG CAAGGACAGT TCCGCCCTCA CCGGGTCGCG CCTGTCCTAG
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Protein sequence | MSPTTSLRIV VLKWDRLYGD LIRRQIWDVW PNAVVQVFQR GLAALDAIQE ATPNLFIAGV KIEDMDGLEH LEPFTQTELP ILIVTSRADA RTFKMLRHVR YDGIYDGSSE GLEHLAPALR QAMQHRLYVS PALLPFLQER RSTTLDALTE REQIVLSVIG DGSDNAQASE RLGISAKTVG THREAIMRKL GLHQIGQLML YALQNGYVLV TAKGVFYPGF QRRFCHGKDS SALTGSRLS
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