Gene Oter_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1052 
Symbol 
ID6205158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1312823 
End bp1313719 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID641690695 
Productband 7 protein 
Protein accessionYP_001817940 
Protein GI182412874 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA ACAACATCAT CAAAGACACC CACCGCGCTC TCTGGTATGA GGACGGCGTC 
ATGACGCGCG TCCTCGGCCC CGGCCGCTAC AAGCTGCCGT CGCGCTGGCG CTATCTCTTT
CGCCGCAAGC CGCAGATCGA AGTCATCCCG GTCGACGTGC GCGAGCGCGA CCTCACGATC
AAGGGCCAGG AAATCCTCAC GGCCGATAAA GTCGCGATCC GCGTGAGCAT TCTCGTGCAG
TTCAAAGTCA GCGATCCGGT GGCTGCACTG CACCAGGTGA ACAATCACGA CGAACGCCTT
TACAGTGACG TGCAGCTCGC CGCGCGACGT TCGCTCGCAT CGATGACGCT CGAGCAGATT
CTCACTAACC GAAACCAGCT CAGCGAAGAC ATCCTTAACG AGGTCAAGGG CATCGCGGCG
ACCTACGGCG TCGCGATCCT GCGCGCGGAC GTGAAGGACC TCGTTTTCCC CGGCAATCTC
CAGGAGATCA TGAACAAAGT GCTCGCCGCC GAACGCCTGG CACAGGCGCA GCTTGTCGAA
ACGCGCACAA AGGCCGAGCA ACAGAAGATC GAGGCCGAGG CCAAGGCGCA GATCAAACTC
GTCGAGGCGA AGAGCACCGC CGAAACCGAT GTGACGATCG CCGAATCGCT CGCCGCGTCA
CGCCTCAAGC AGGCACACGC GGAAGCCGAG GCGCTGCGCA TTCAGAACGA GGCTGAGATT
CGCGCGCTTC GCGAACAGGC AAGCGCCGCC GAAGCCTACG CCAAGCATCC GGCACTCCTC
CGCCTGCGCG AGCTGCAGGC GCTCTCCGAA ACCGTGAAGA ACGCCAACGC GCGCATCTTC
GTCGGGTTCG ACAAACACGC GGACTTGAAG GCGGAAGCCA AGGCGCTGAT GGCGTAG
 
Protein sequence
MKSNNIIKDT HRALWYEDGV MTRVLGPGRY KLPSRWRYLF RRKPQIEVIP VDVRERDLTI 
KGQEILTADK VAIRVSILVQ FKVSDPVAAL HQVNNHDERL YSDVQLAARR SLASMTLEQI
LTNRNQLSED ILNEVKGIAA TYGVAILRAD VKDLVFPGNL QEIMNKVLAA ERLAQAQLVE
TRTKAEQQKI EAEAKAQIKL VEAKSTAETD VTIAESLAAS RLKQAHAEAE ALRIQNEAEI
RALREQASAA EAYAKHPALL RLRELQALSE TVKNANARIF VGFDKHADLK AEAKALMA