Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1052 |
Symbol | |
ID | 6205158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1312823 |
End bp | 1313719 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690695 |
Product | band 7 protein |
Protein accession | YP_001817940 |
Protein GI | 182412874 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA ACAACATCAT CAAAGACACC CACCGCGCTC TCTGGTATGA GGACGGCGTC ATGACGCGCG TCCTCGGCCC CGGCCGCTAC AAGCTGCCGT CGCGCTGGCG CTATCTCTTT CGCCGCAAGC CGCAGATCGA AGTCATCCCG GTCGACGTGC GCGAGCGCGA CCTCACGATC AAGGGCCAGG AAATCCTCAC GGCCGATAAA GTCGCGATCC GCGTGAGCAT TCTCGTGCAG TTCAAAGTCA GCGATCCGGT GGCTGCACTG CACCAGGTGA ACAATCACGA CGAACGCCTT TACAGTGACG TGCAGCTCGC CGCGCGACGT TCGCTCGCAT CGATGACGCT CGAGCAGATT CTCACTAACC GAAACCAGCT CAGCGAAGAC ATCCTTAACG AGGTCAAGGG CATCGCGGCG ACCTACGGCG TCGCGATCCT GCGCGCGGAC GTGAAGGACC TCGTTTTCCC CGGCAATCTC CAGGAGATCA TGAACAAAGT GCTCGCCGCC GAACGCCTGG CACAGGCGCA GCTTGTCGAA ACGCGCACAA AGGCCGAGCA ACAGAAGATC GAGGCCGAGG CCAAGGCGCA GATCAAACTC GTCGAGGCGA AGAGCACCGC CGAAACCGAT GTGACGATCG CCGAATCGCT CGCCGCGTCA CGCCTCAAGC AGGCACACGC GGAAGCCGAG GCGCTGCGCA TTCAGAACGA GGCTGAGATT CGCGCGCTTC GCGAACAGGC AAGCGCCGCC GAAGCCTACG CCAAGCATCC GGCACTCCTC CGCCTGCGCG AGCTGCAGGC GCTCTCCGAA ACCGTGAAGA ACGCCAACGC GCGCATCTTC GTCGGGTTCG ACAAACACGC GGACTTGAAG GCGGAAGCCA AGGCGCTGAT GGCGTAG
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Protein sequence | MKSNNIIKDT HRALWYEDGV MTRVLGPGRY KLPSRWRYLF RRKPQIEVIP VDVRERDLTI KGQEILTADK VAIRVSILVQ FKVSDPVAAL HQVNNHDERL YSDVQLAARR SLASMTLEQI LTNRNQLSED ILNEVKGIAA TYGVAILRAD VKDLVFPGNL QEIMNKVLAA ERLAQAQLVE TRTKAEQQKI EAEAKAQIKL VEAKSTAETD VTIAESLAAS RLKQAHAEAE ALRIQNEAEI RALREQASAA EAYAKHPALL RLRELQALSE TVKNANARIF VGFDKHADLK AEAKALMA
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