Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1051 |
Symbol | |
ID | 6204918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1311140 |
End bp | 1312675 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690694 |
Product | hypothetical protein |
Protein accession | YP_001817939 |
Protein GI | 182412873 |
COG category | [S] Function unknown |
COG ID | [COG1690] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.738167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATGG AAATCAAAGC CCGCGATCTC ATCGCTGCCG GCTGGCACGA AGGCCGCCGC CTTGGCCCGG CCCTGCGCCG CGCCCGCGAC TTGGAGTCGA CGGGTCTTGC GCGTGCCGAC GTTTTGACCG CGCTTGAAGC CGAATTCCCG AAGCAGCTCG CCGTGACCCT GCCGCGCTAC GAGCCGGCTC CGCTTGCCGA GGCCATCGAG GCCGAAACGC GCGAGGAAGC GACGAACGTT GCCGCCGCGC GTCAGCGCAT GACGGAGCTG CTGCACGTCC CGGTAGTGAA GCGCGGCGTA ATCATGCCTG ACGCCTGCCC GTCGGGCGGT GGTCGCGCCA CGATCCCGGT CGGCGGCGGC ATCGAGGTCG AAAACGCAAT CATTCCCGGT GCGCATTCGG CTGACATCTG CTGTTCTATG TTCGCGACCT TCTTTCCCGC CAACCATCCG GTCGGCGAAA TGATGGATCA CCTGCAGAAG ACGACGCACT TCGGCGCCGG CGGTCGTCCG CGCGGATACC AGATGACTTC GGCTGTGCTC GAAGAGCCGG TGTGGGACAA CCCTTTCCTC TCCGGCCTGC GCAGTCGCGC CCAGGATTTC CTCGGCACGC AAGGCGACGG CAACCACTTC GCCTACGTCG GTCGCATTCA GTTCACCGAA GCGCAGCGTG CTGCCATCGA AGCAGCCGGC TACACCGAGC TGTCCGAATG GATCATGCGC CGCGACGGCG CGTTCAACGT CCTCGTCACT CACCACGGTT CGCGCGGCCT TGGCGCGGAC CTCTACAAGC GCGGCCAGAA GGCTGCCCGC CTGTGGTGCG ATGAGAATGC CAAGGACATT CCGGATTCGG CCGCGTGGCT TCCGGGCGAC TCGCCCGAGG GTCGCGACTA CTGGGATGCG CTCCAATACA TCAGCCGTTG GACCCGGCAG AATCACGCCG TGCTGCATGA CGCGCTTCTC CGCCGCCTCG GTCAGCGCGC GCTCGTGCAA ATCGGCAATG AGCACAATTT CGTCTGGAAG CGCGGCGACT CGTTCTTCCA CGGCAAGGGC GCCACTCCGG CATGGCAGGA CGCGCAAGGC CGTCCACTGC TCGGCCTCAT CCCGCTCAAC ATGGCGCGCG AAATCCTCCT CGTGCTTGGT TCGAACAACA ACGACTACCT GTCGTTCTGT CCGCACGGCG CCGGCCGCAA CCTCTCGCGC ACCGCCATGC TCGCGCCCTA CAAGGACGCT GAGGGCGAAC TCGATCCTGC GCGTGTGCAG GAAACGCTTG CGGCGTGCAC GGCCGGTCTC GACATCCGCT GGTTCGGCGG CGCACCGGAC TTGTCGGAGT CGCCGCTCGG CTACAAGGAC GCGACCAAGG TGAAGGCCCA GATCGATCGC TTCGGCCTGG CCAACGTCGT CGGCGAGATT CAGCCGCAAG GCTGCATCAT GGCCGGCGAA GCACCCGAAC CGCACTGGGT CCGCGCCCGT CGCGAAAAAC GCGCGAGCCA CAAAGCCGCG CGCCGCGAGG GCGAGGCCGA AACCATCGAT TCCTAA
|
Protein sequence | MNMEIKARDL IAAGWHEGRR LGPALRRARD LESTGLARAD VLTALEAEFP KQLAVTLPRY EPAPLAEAIE AETREEATNV AAARQRMTEL LHVPVVKRGV IMPDACPSGG GRATIPVGGG IEVENAIIPG AHSADICCSM FATFFPANHP VGEMMDHLQK TTHFGAGGRP RGYQMTSAVL EEPVWDNPFL SGLRSRAQDF LGTQGDGNHF AYVGRIQFTE AQRAAIEAAG YTELSEWIMR RDGAFNVLVT HHGSRGLGAD LYKRGQKAAR LWCDENAKDI PDSAAWLPGD SPEGRDYWDA LQYISRWTRQ NHAVLHDALL RRLGQRALVQ IGNEHNFVWK RGDSFFHGKG ATPAWQDAQG RPLLGLIPLN MAREILLVLG SNNNDYLSFC PHGAGRNLSR TAMLAPYKDA EGELDPARVQ ETLAACTAGL DIRWFGGAPD LSESPLGYKD ATKVKAQIDR FGLANVVGEI QPQGCIMAGE APEPHWVRAR REKRASHKAA RREGEAETID S
|
| |