Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0989 |
Symbol | |
ID | 6205413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1215529 |
End bp | 1216341 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690612 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001817877 |
Protein GI | 182412811 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.168656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00764497 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGTC GCCCTCTCCT CGCCGGACTC GCGCTCCTGA TCGGCGCTGC GGCCCCGGCG CTGCTGCACG CCGGTTTCAG TCTGAAAAAT CTCGATCTCA ACAAGGTCGT CGACACGGCG AACAAGATCG GCAAAGGCGC CAAGGCGCTC GCGCCGATCG GTCCGCAGGA AGAGCGGATC ATCGGCGAGT CGGTCGCACT GCAGATCATC GGAAAATACG GCGGGCTGGT CCGCGACGAG GCGATCACGC GCCGCGTGAA TCTGATCGGT CACGCGCTGG CCTACTATTC GCCGCGTCCG GTGCTTGCGT GGCGCTTCGG CGTGCTCGAC TCACCATCGG TAAACGGCTT CTCGGCGCCA GGCGGATTCG TGTTCATCAC CCGCGGGCTC TACGAGCTAT GCGACGACGA CCACGCGCTC GCCGCGGTGC TGGCGCACGA GATCGCGCAC ATCACCGGCC GGCATGCGTT GAAGATCATC GATCGAACCG AGTTCGTGAA CACCGCCGCG GATTTCGCCG CTGAACGCAG CAGCGACGTC GCCCAGGTGC AGGCGCACCT CAGTCAGTTC GACCTCGGGA TCGACAAGGT GCTGAACACG CTTTTTGAAA AAGGCTTCGA TCCGCAGACG GAGTTCGAGG CCGACAAGAG CGGCCGCCAG CTCGCGACGA CCGTCGGCTA TGCGCCGGGC GGGCTGCGGG GCGTCCTCAC CCAGCTGCAG CAGAAAGCTC CGATGGAGGA AGCACCGGTC TATTCGACTC ACCCGCCGCT CGGCGAGCGA ATCGCTCGAT TGCCGCAGGA GGGGCCGATG TAG
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Protein sequence | MKRRPLLAGL ALLIGAAAPA LLHAGFSLKN LDLNKVVDTA NKIGKGAKAL APIGPQEERI IGESVALQII GKYGGLVRDE AITRRVNLIG HALAYYSPRP VLAWRFGVLD SPSVNGFSAP GGFVFITRGL YELCDDDHAL AAVLAHEIAH ITGRHALKII DRTEFVNTAA DFAAERSSDV AQVQAHLSQF DLGIDKVLNT LFEKGFDPQT EFEADKSGRQ LATTVGYAPG GLRGVLTQLQ QKAPMEEAPV YSTHPPLGER IARLPQEGPM
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