| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0869 |
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| Symbol | |
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| ID | 6205773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1072814 |
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| End bp | 1074193 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690492 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001817757 |
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| Protein GI | 182412691 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAT CACCCCGCCT GCTCGTTTCC GCGTGCGTTG CACTCGCCGG TTGTGCGTCC
GTCCTTTTCT CCGCGGAGCC TCCGCAGATC TGCGCCGGCC AGCCCGCGCT CGGTCAACCC
GAATGGGTTC GCACCGCGAC AATCTACGAG GTGAACGTGC GGCAGTACTC CCCGGCGGGG
AACTTCGCGG CTGTAACCGC CGATCTTCCG CGGCTCCGCG ATCTCGGCGT CAACGTGCTC
TGGCTGATGC CGATTCACCC TATCGGCGAA CACAACCGAA AAGGCCCGCT CGGCAGCTAC
TACGCCGTCC GCGACTACTA CGGCGTGAAC ACGGAATTCG GCACGAAGGA GGATTTCAAA
CGCCTCGTCG ACTCCGCTCA CGCCGCCGGA CTTCGCGTGA TCCTCGACTG GGTCGGCAAT
CACACCGCTT GGGACAATCC ACTCACGCAG CAGAATCCAG ATTATTTCGT GCGCGACGCG
AAAGGCTCCT TCGTGCCGCC GACCGGGTTC GATTGGACGG ATGTGATCCA GCTGGATTTC
AGCAACCCCG CCGTTCTCGA CTATCAAGCC GGGGCGATGG CTTACTGGAT CGAGAACTTT
GGTGTCGATG GCTACCGTTG CGATTTCGCG ACCGGCGTGC CGACGGCGTT TTGGAACCAG
CTTACCGCGC GGCTGCGAGC GATTCGTCCT GACCTTTTCA TGCTCGCCGA ATCCGAGCTG
CCCCAGCATC AGCTCGCCGC CTTTAACGCG TCCTACGGGT TCGACATGAT GCACACGTTC
AACGCCGTCG CCCAAGGCCA CGTCGGCGTC TCCGGCATCG ACGACACGCT GGCGCGGTCG
CGCGTGCGGC TGCCCGCCGG CGGCGCGCTG CTCTACTACA CGAGCAACCA CGACGAGAAC
AGCTGGCAGG GTACGGAGTT CGAACGGCTC GGCGGCGGCG CGACTCCGCT CGCGGTGCTT
TCGTTTGCGC TCGATGGGAT TCCGCTCATC TACAACGGCC AGGAGATCGG CGTGAATCGT
CGGCTCGAGT TCTTCGAACG TGACCCGATC CAGTGGACGA CCGCCCATCC GTTGACGGCG
TTTTACCGCA CGCTCTGCCA GCTGAAGCAC GCGCATCCGG CGATGCGCAC CGGCACGCCG
ATGCGCCGAC TGGCCACGAC CCAGAACGAT TCGCTTTACG TGCTGGTCCG CGAAGCAGGT
TCTCACCGCG TGGTCGTGAT GCTCAACCTG ACGGCGCGCG ACGTGACCGC CGATTGCCAT
GACGCCGCTC TGGCGGGGTC GTGGCGCGAT GCTTTCACCG GCGAGAATCT GGTTCTGCCC
GCGGGCTCCA CGTTGGCTCT CCGGGCGTGG AGCTATCGCG TGTTGGCCTC GCAACCTTAG
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| Protein sequence | MTKSPRLLVS ACVALAGCAS VLFSAEPPQI CAGQPALGQP EWVRTATIYE VNVRQYSPAG
NFAAVTADLP RLRDLGVNVL WLMPIHPIGE HNRKGPLGSY YAVRDYYGVN TEFGTKEDFK
RLVDSAHAAG LRVILDWVGN HTAWDNPLTQ QNPDYFVRDA KGSFVPPTGF DWTDVIQLDF
SNPAVLDYQA GAMAYWIENF GVDGYRCDFA TGVPTAFWNQ LTARLRAIRP DLFMLAESEL
PQHQLAAFNA SYGFDMMHTF NAVAQGHVGV SGIDDTLARS RVRLPAGGAL LYYTSNHDEN
SWQGTEFERL GGGATPLAVL SFALDGIPLI YNGQEIGVNR RLEFFERDPI QWTTAHPLTA
FYRTLCQLKH AHPAMRTGTP MRRLATTQND SLYVLVREAG SHRVVVMLNL TARDVTADCH
DAALAGSWRD AFTGENLVLP AGSTLALRAW SYRVLASQP
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