Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0779 |
Symbol | |
ID | 6208618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 951454 |
End bp | 953718 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690402 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001817667 |
Protein GI | 182412601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTC GCGATCTGCC CATCAAACGG AAACTGGCCG GCGCCATCAT GCTGACCAGC CTCACCGTCC TGGCGCTGAC CTCGCTGGCG CTGATCACCT ACGAGCTTTA CGCCTACAAA CAGACCACCC GCCGCACGCT CTCGACCATC GCCGACATCA TCGCGTCCAA CAGCACGGCG GTGCTGATCT ACGACGACCA CAAGCTCGCC AGCCAGATCC TGGCGGGGTT GCACGATGAA CCGGAGATCG AGGCGGCGGC ACTGTATGAC AAGGATGGAC AGCTGTACGT GTCCTATCCC CTCTCGCTCG GCCCCACCGG CGTACCGGCG ACCCCCGGCG TGGACGGCAT CGATTTCGGC TTGCGGCAGA TCACGCTGTT CGAGCCGGTG ATCGAGGGCC AGAACCGCGT CGGCACGTTG TACCTGCGCG GTGACCTCGC CGACATGTAC CGCCGGCTCG GCGTCTACGG ACTCGTGCTG CTCAGCGTGC TCGGTTGCTC GGGGCTGGTC GCGCTGTCGC TGGCGGCTTA TTTCCAGCGG CTGATCTCCC AGCCCATTCT CAACCTGGCC AACACCGCGC GCATCGTGTC CGAGCGGAAG GACTACTCCG TGCGCGCCGT AAAGCTGAGC AACGACGAGC TCGGCGGGTT CACCGAAACC TTCAACTCGA TGCTGCACCA GGTGCAGGAA AGCCATTCGG CGCTGCGTGA GAGCGAGGAA CGACTCTCCG CGGTGTTCCA GCAGGCCGGC GCCGGTATCG CGCAGACGGA TGTCAGCGGG CGCTTCCTCA TGGTCAACGA CCGCTACTGC GAGATCGTCG GCCGCCCGCG CGAGTCGCTG CTCCAGCTCC GGATGCAGGA CATCATTCAC CCCGCGGACC TGAGCCATCA TCAGTTCCTG AGCGAACACT CCGCCCGCGA CGGCTCGTCG TTCGTCGTCG AAACCCGTTA CGACCGGCCG CAGGGCGGCT TCGTCTGGGT GCGCAACAGC GTCGCGTTCA TCCGCGATGC CGCTGGCACC ATCGAATCCG CGATCGCGGT GACCGAGGAC ATCACCAGCT CCAAGCGCAC GGAGAAGGAG CTCGAGCGCG CGCGCGACGA CGCGCTGGCC GCCTCGCGCG CGAAGGACGA TTTCCTCGCC ACGCTCTCGC ACGAGCTGCG CACGCCGCTG AATCCCGTGC TGCTGCTCGC CAGCGAAGCG GCCGAGGACC CGACGCTCCC GCCCGCCGTC CGCAGCGACT TCGCCACGAT TCGCAACAAC GTCGAGCTCG AGGCCCGGCT GATCGACGAC CTGCTCGACC TGACGCGGAT CACGCGCGGC AAGCTGCTGC TCGATTTGAA GCCGCACGAC ATGCACGCGA TCCTGCAGGA CGCGCTCGCG ACCGTGCGGG CGGAGCTGGA GCGGAAGCAG ATCGTCACCA CGCTCAAGTT CGACGCCGGC CGGGCCGTGG TGCTCAGCGA CGCCGTCCGG CTGCAACAGG TGTTCTGGAA CGTGCTGAAG AACGCGGTGA AGTTCACGCC CGAGCAGGGC GGCATCACCG TGCACACGCA TCTCGCGGTC GGCGATTCGC TCGTCGTCGA GATCACCGAC ACCGGCATCG GCCTCGAGCC GGCCGAGATC GAGCGGATCT TCGACGCGTT CTCCCAAGGC GACCACGCGG GCACGGCGGG CTCGCATCGC TTCGGCGGCG TCGGCCTCGG CCTGGCGATT TCCCGGATGC TGGTGGAACT GCACCGCGGC TCCATTCGCG CGGAAAGTCC GGGCCGGGGA CACGGCGCCA CGTTCCGCAT CGAGCTGCCG CTGCTGCGGC GCGATGTCGC CGCACCGCGG ATGCCGGCCG CCGATGGCCC GCCCGCCCGC GCGGCCGCGG CTGCAGGCTC GGCGGTGCCC GAAACGATGC GGCGCCGGAT TCTGCTGGTG GAGGATCACG CGCCCACGCG CACGACGCTG CAGCAGCTGC TGATGCGGCG CCGCTACGAA GTGCTCGCCG CCGGCACGGT GGCGGAAGCC CGCGCCATCG CCGCCAAGGA AAGCTTCGAT TTTGTGATCT CCGACATCGG GCTGCCGGAC GGCAACGCGT ATGAGCTGAT GTCCGACCTG CGCGCGGAAA AAGGACTCAC CGGCATCGCG CTCACCGGTT ACGGAATGGA AAGCGACATC GCGCGCAGCC ACGCCGCCGG CTTCGTCGTG CATCTGACCA AGCCGCTGCG CGTGCAATCG CTCGACGAAG CGCTGGCCCG CATTTCCGGC GCCACGCCGG CGTAA
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Protein sequence | MDFRDLPIKR KLAGAIMLTS LTVLALTSLA LITYELYAYK QTTRRTLSTI ADIIASNSTA VLIYDDHKLA SQILAGLHDE PEIEAAALYD KDGQLYVSYP LSLGPTGVPA TPGVDGIDFG LRQITLFEPV IEGQNRVGTL YLRGDLADMY RRLGVYGLVL LSVLGCSGLV ALSLAAYFQR LISQPILNLA NTARIVSERK DYSVRAVKLS NDELGGFTET FNSMLHQVQE SHSALRESEE RLSAVFQQAG AGIAQTDVSG RFLMVNDRYC EIVGRPRESL LQLRMQDIIH PADLSHHQFL SEHSARDGSS FVVETRYDRP QGGFVWVRNS VAFIRDAAGT IESAIAVTED ITSSKRTEKE LERARDDALA ASRAKDDFLA TLSHELRTPL NPVLLLASEA AEDPTLPPAV RSDFATIRNN VELEARLIDD LLDLTRITRG KLLLDLKPHD MHAILQDALA TVRAELERKQ IVTTLKFDAG RAVVLSDAVR LQQVFWNVLK NAVKFTPEQG GITVHTHLAV GDSLVVEITD TGIGLEPAEI ERIFDAFSQG DHAGTAGSHR FGGVGLGLAI SRMLVELHRG SIRAESPGRG HGATFRIELP LLRRDVAAPR MPAADGPPAR AAAAAGSAVP ETMRRRILLV EDHAPTRTTL QQLLMRRRYE VLAAGTVAEA RAIAAKESFD FVISDIGLPD GNAYELMSDL RAEKGLTGIA LTGYGMESDI ARSHAAGFVV HLTKPLRVQS LDEALARISG ATPA
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