Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0687 |
Symbol | |
ID | 6207497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 843255 |
End bp | 844253 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641690311 |
Product | hypothetical protein |
Protein accession | YP_001817576 |
Protein GI | 182412510 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCG CACAACAAAC CGCCCGCGTC GGGCTCTTTT TCGTCCTCGG CCTCGCTTTG ACCTGGGTTA CTTTCGAGAC CCTCAGCGGC GGCAAGATCT TTCGGGAAGA CGGCTACACG CTCATTGCTC CGTTCGGCTC GTTGAAAGAG CTGAAGAATG GCGACGAGGT CCGGATGGCC GGCGTGAAGA TCGGCGTCGT CGAGCGCACC CGTTTGAACC CCGAGAAACG ACGCGCCGAG GCGATCCTGC GGATCAACAC TGACTCGACG ATCCCGAGCG ACGCCGTCGC CTCCATCTCG ATGTCCGGGC TGATCGGCAC GAACTACATC GCCGTCGATC TCGGCACCCC GAGTGCGCCG GTGCTGCGGC CGGGTGATGA AATCCGCACG CGCAACACCG CCGATTTCAA CTCGATCATG AGCGACCTCG GCAATCTCGG CCAGAAACTC GAGGGCGCGC TGGGCGCGTT CGGCAAGGCC ATGAGCGGCG AGGAAGGCCA GCCCGGTTTG TTCCAGAAGC TCGACCGGCT CGTGACCGAA AACCAGGAGA AGGTCACCGC GACGATGAGC AATCTCCAGG ACATCACCGC CAAGGTGAAC CAGGGGCAGG GCACGCTCGG CAAGCTCGTC AACGATCCCG CGCTCCATGA CGAGCTGCTT GCGGCGGTGC AGGACATCAA GGGTGCCGCT GCTGGCGCCA AGGATTTCAT GGCCAACGCG CAGGCCATCG TCGACCAGGT GAAATCCGGC AAGGGCACGA TCGGCGCGCT CGTCTACGAC GAAAACGCCG CGAGCGACCT CAAGGCCACG ATGGCGAACT TCCGCTCGGT GTCCGACAAG ATCGCCAAGG GCGAAGGCAC GCTCGGCAAG CTAATCCGTG ACGACCAGCT CTACCAGAGC GCACAGTCGA CGCTAAAGAA GGCCGACCGC GCGCTCGACG GCATGAGCGA CTCCGGCCCG ATCACCGCCG TCGGCGTCGT CGCGAATTCG CTGTTCTGA
|
Protein sequence | MNTAQQTARV GLFFVLGLAL TWVTFETLSG GKIFREDGYT LIAPFGSLKE LKNGDEVRMA GVKIGVVERT RLNPEKRRAE AILRINTDST IPSDAVASIS MSGLIGTNYI AVDLGTPSAP VLRPGDEIRT RNTADFNSIM SDLGNLGQKL EGALGAFGKA MSGEEGQPGL FQKLDRLVTE NQEKVTATMS NLQDITAKVN QGQGTLGKLV NDPALHDELL AAVQDIKGAA AGAKDFMANA QAIVDQVKSG KGTIGALVYD ENAASDLKAT MANFRSVSDK IAKGEGTLGK LIRDDQLYQS AQSTLKKADR ALDGMSDSGP ITAVGVVANS LF
|
| |