Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0608 |
Symbol | |
ID | 6206755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 743453 |
End bp | 744262 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690231 |
Product | two component transcriptional regulator |
Protein accession | YP_001817498 |
Protein GI | 182412432 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.912503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCCAC GGCTTCCAGT CCTTTCGGTT CCTTTGTCCG TCCCCGCCGC CGGCCCTGCC GGTACCAACC GCGCTCCGCG CCCACGGATT CTGCTCGTCT CCGACCGAGC GCCCAGGCCC GAGTCGCTCG CCGGACTGCT CGTGGAGAAC GGCTATCTTG TATTCCATCT GCCGCTGGCC GCCGATCCGT TTCATCCGGT GCTCGGTGTG CGCCCCAGCC TGATCGTCAG CGAAATTCCC GCCACCTTCC GCGGGCGGGA CTCCTGGCTT GGCCAGCTGC GGCGGTGCGG GATCAGGACG CCCATCCTGC TGGTGTCCCC CACCCATTCC ACCGCAGACC GGATCCAGGG ACTACAGCAC GGCGCCGACG ATTGTCTCGG GCAACCGTTT CATCCCGCCG AGTTGCTGGC GCGTGTGCAG GCCCTGCTTC GCCGCAGCAC CGGTCCTCTT CCGCTGACTG CTTGGGTGCG CTTCGGACCA GTGGTCGTCG ACCTGCGGCG GATGACCACC ATCGATCCGC GTGGCCAAAG CCGGCTCTCC CGGATCGAGT GCGCCTTCCT GGACCTGCTG GTGCACGCCC GCGGCCGGGC CGTTTCGCGT GAAAGGTTGC TCCGCGCCAT CTGGGGCAAT GTGAACCCAC CGGCCAGTCG ATCCGTGGAC ACCCACGTCT GGCGGTTGCG CCGAAAGATC GGGGATACCG GCCACGAGCC ACACTGGATC AAGAGCGTGC CCGGCGTGGG CTATCAGCTC GAATACACCG AGTGTCACAT CTCGCCGTCT CTCCACGCGA TTCACGAGCC AACGCGTTAG
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Protein sequence | MRPRLPVLSV PLSVPAAGPA GTNRAPRPRI LLVSDRAPRP ESLAGLLVEN GYLVFHLPLA ADPFHPVLGV RPSLIVSEIP ATFRGRDSWL GQLRRCGIRT PILLVSPTHS TADRIQGLQH GADDCLGQPF HPAELLARVQ ALLRRSTGPL PLTAWVRFGP VVVDLRRMTT IDPRGQSRLS RIECAFLDLL VHARGRAVSR ERLLRAIWGN VNPPASRSVD THVWRLRRKI GDTGHEPHWI KSVPGVGYQL EYTECHISPS LHAIHEPTR
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