Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0542 |
Symbol | |
ID | 6204338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 646897 |
End bp | 648264 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641690164 |
Product | hypothetical protein |
Protein accession | YP_001817432 |
Protein GI | 182412366 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC AGAAGGAAGC TCCCAATTCC TCCATTTTGC CTGATATTCC GCGGCGCTCG CTGCTGATCA GCCCCGCCCC AATAGGGCTG GGGTCGGTAG CCGCTGAATC CCTATTTAGC TATTTTTGCC GTGTCGCTCT GCAGAACAGT TTTTCGCCGG GTCATCTGGT GTTCGGTCCA TTTACGGCGC TGGCTACACA AGAGCGTGAT GGCGGATTGG TGTTCCGGCG GACGGCTCGG GCCTCACTCG CCCGCCGAAC TGTGAGCGTC TCCGAGATCG GCTATCAGTT CGCCACACGG CTCGCGAGTT TGGTCGGCAG GCCGGAGGTT ATGAGGATGC ATTGGCGCCA CACCCTGAGT GGCTACTCGT TTGCGCGCAT GACGCGAGGC TTCGCCGCAT ATTGTCCTAA GTGCTTAGGT TCAGATCTAG AGCCACATGA GCACATCGCA TGGGAGTTGG CGCTTTTTGG TGCCTGCGTG CGGCATCAGT GCGTTTTGGT GTCCCGTTGT GGTCGCTGCG GTCGCCGGGC GAGTCGGCTG AGTCTCAAAG GCAAGCCTTG GGAATGCCCC TTGTGCGGGC ACGATCGCCG TCTAGATCAT GCTCGGTCGG CAGGGCATGC GGAAATCGCC GCCGCCGAGG AACTCGGCGC CCTGGTGGCC GAAGCTACCG CCGCCAAACC TGCCGGCTAC CTTGCCGCCC GAGATTGTGT CGAACGGCTT ATGGGATGGG CGGACACGCA CGGGGCGCGA TCGGTCAAGC AGGTAGCGAA ATACTTCGCC ATTTCGGTTG GTACCGCATC GCTGTGGCGC AGCAAACGAA TCCGACCCTC GGCATCCCGG CTAGTTGAAC TGGGCCTCCG GAACGGCCTG CCACTACCGG CGCTATATCG GGGAGATTTC AGCGCGGTTC GCCCTGCGCC GACGACGCGA GGACTTGCCC TTATCTGGAA GAGGCGGCGC CTAACAGGCG CCGAACGCTC GATCATCACG ATCAGGACGG AAGCTCTGGC CACTCTGAAC CCAATGCGAC CCGTGCCCGA GGTCGCGGCC GAGCTCAACA TTTCGCCACG AACCCTTCGG CAGATCGCTC CTGAGCTATG CTCTCAGATG AAGGCTAACT ACGCCGCCAA TCGGCGCCGG ATCAAAGAGA GAAAAATGGA GTGGTTCTGC CGTAAGGTTG AGAGCTATGT GGCGGCCTGT TTCCTCAATC GACAGCCGCC CACCTGGCAG GGGTTTTCGC TCGTTTTTCA AAAACCGGGG ATCCTCCGTA ACGAGGTCCG GCGGCGTTAC GCAAAACGAG CAATTCGGCG AGCCCAGGAA CTGCTGCCCG GTGTGCCGGA GCAAATGCTT CTGGATATTT CCGTTTAA
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Protein sequence | MSNQKEAPNS SILPDIPRRS LLISPAPIGL GSVAAESLFS YFCRVALQNS FSPGHLVFGP FTALATQERD GGLVFRRTAR ASLARRTVSV SEIGYQFATR LASLVGRPEV MRMHWRHTLS GYSFARMTRG FAAYCPKCLG SDLEPHEHIA WELALFGACV RHQCVLVSRC GRCGRRASRL SLKGKPWECP LCGHDRRLDH ARSAGHAEIA AAEELGALVA EATAAKPAGY LAARDCVERL MGWADTHGAR SVKQVAKYFA ISVGTASLWR SKRIRPSASR LVELGLRNGL PLPALYRGDF SAVRPAPTTR GLALIWKRRR LTGAERSIIT IRTEALATLN PMRPVPEVAA ELNISPRTLR QIAPELCSQM KANYAANRRR IKERKMEWFC RKVESYVAAC FLNRQPPTWQ GFSLVFQKPG ILRNEVRRRY AKRAIRRAQE LLPGVPEQML LDISV
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