Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0492 |
Symbol | |
ID | 6207418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 584697 |
End bp | 586457 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641690114 |
Product | TPR repeat-containing protein |
Protein accession | YP_001817382 |
Protein GI | 182412316 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.154426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC GGCAACTCAT CCTCGGCCTT GTGCTGGTCG CCGCGACGGC GGTCGCGGGC ACCGCGGCGT TCCGGCTCTG GCGCGAGCAA TCGCGTGCGG CGCGGGCGTG GGCGGCCCTG CCGCCGACTC CGAATTTGAT TCGCTGGCCG GCCGAGATGG TGGCTGCCGT GCAGGAGGCG GCTGCGGCCG TGCGCGCATC GCGCGACCCG GTGAAGCCGT TGGGCCAGCT CGCCATGCTC TATGTCGCGA ATGGCTTCGG GAGCGAAGCC GAGCGGTTGC TGCACGCCCT GCGGCGATTG CAGCCGAAGG AGGCGCGCTG GCCTTATCTG CTCGCCGAGC TGCACCGGCG CGCGGGCGAT CGGGATCGCG TCGAGCAGGC GCTCGAGATG ACGGTCGCGC TCGCACCGGA CTACGCGCCG GCCTGGCTGC GACTCGGTGA CCTGATGCTC GAACAGAAAC TGTTCGGCCG CGCGCAGCGC TGTTTTCAGC AGGCGAGCCT CGTGGCTCCG GGCGAAGTGC GGACACGGTT CGCGGTGATC GCCTTCGAGG CGCGGCACGG CCGGCGCACC GATCCGCGAC CAAGCTTGAT CGTGCTCGCC CGCGATAATC CTGGCATTCG GGAACTGCAC GAACTCCTCG CGCAGTTGCA TGCGGCTGCA GGCGATCCGG TTCGCGCCCA GCAAGAGCAG CGGCTGCTGG AGCGAGCGGA CCGGCGACTG GGCATGCCGG ATCCGTGGAT GGAGGAGTTG CTCGAGCATT GCTATGAACC GAACCGGCTC CAACGTGCCG CGCAGCGTTT CGCCGCGGAG AAACGACTGG ACCTCGCCGA ATCGCTGCTG CGGCGCGCGA CCTCGTTGAG CCCGGCGGAT CCCACTCCGC GGTCGGCGCT GGCGCAGCTG CTGGTGAGCA GCGAGCGGAT TCGCGATGCG CGCACCGTGC TCGAACAGGC GTTGGTGGAG TGTCCCGACG AGCCGATGGT GCCGATCGCG CTGGCGCGCG TGCTCTGCCA GGAGCACAAG CCGCTCGAGG CCGTGGCGAT TGCGCAGGCG GCGCTGGCCT GCTGGCCCGA ACACGCCGGG TTGCACGCGG CGGTGGGTTA CGCATGGCGG GACGCCCGGG AGAACGAAAC CGCGCTGGCG GCGCTGCGCG AGGCGCTGCG GCTCAACCCG ACGCTCGTCG AGGCGCAGTA CAACCTGGCT TTTTGCCTGA TGGCCCTGCG CCAGCGCGAA GCCGCGCAGG TGGCGGTACA GCGGGCCCTG ACCCTGCGGC CGGATTACCC GGAAGCGCTC GTCATGCTGG GCGGCCTCGA GCTGGACAAT GGCGACGTCG CCGCGGCGCA ACGGCACATT CTCGCATTGT TTGAACTCCG GCCCGACGAG CCCGGCTCGC GGCTGCTCTA CGCGGCACTG CATCACGAAC TCGGGAATCG CGCCCGTGAT GAACGCAAAT TCGAAGAGGC CGATCGACGC TATCGCGCGG GGCTCGAGGT TTCGCCGCAG TTCGCGCCCC TGCTGCACGA AGGGGCGTTG CTCGCAGCGC GGCGCGCCCA ATATGGCCAG GTGGTCGAGT GGCTGGAACG TTATCTCCGG CTCGCGCCGC GCGATCTCGA GGCCTACATC CTGCTCGCCG AGGCTTATCG CGAGATCCAG CGGCCAGAGT TGCTGGAACG TGCCCTGGAG CGCGGCAGCG AAATGGCGGC GAAAATCGGT GACACGGCCA AGCATGCCGA ATTCGAGACG CGTCTCGATC AACTCTACTG A
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Protein sequence | MTRRQLILGL VLVAATAVAG TAAFRLWREQ SRAARAWAAL PPTPNLIRWP AEMVAAVQEA AAAVRASRDP VKPLGQLAML YVANGFGSEA ERLLHALRRL QPKEARWPYL LAELHRRAGD RDRVEQALEM TVALAPDYAP AWLRLGDLML EQKLFGRAQR CFQQASLVAP GEVRTRFAVI AFEARHGRRT DPRPSLIVLA RDNPGIRELH ELLAQLHAAA GDPVRAQQEQ RLLERADRRL GMPDPWMEEL LEHCYEPNRL QRAAQRFAAE KRLDLAESLL RRATSLSPAD PTPRSALAQL LVSSERIRDA RTVLEQALVE CPDEPMVPIA LARVLCQEHK PLEAVAIAQA ALACWPEHAG LHAAVGYAWR DARENETALA ALREALRLNP TLVEAQYNLA FCLMALRQRE AAQVAVQRAL TLRPDYPEAL VMLGGLELDN GDVAAAQRHI LALFELRPDE PGSRLLYAAL HHELGNRARD ERKFEEADRR YRAGLEVSPQ FAPLLHEGAL LAARRAQYGQ VVEWLERYLR LAPRDLEAYI LLAEAYREIQ RPELLERALE RGSEMAAKIG DTAKHAEFET RLDQLY
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