Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0462 |
Symbol | |
ID | 6208228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 545624 |
End bp | 546565 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690084 |
Product | putative signal transduction protein |
Protein accession | YP_001817352 |
Protein GI | 182412286 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.540815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCTCG ATCCGCCTCT GCTCGAATCC ATGTCTCCTC CACCCGCCAG GAAAGCACCC TACGCCGAGG CGGTCATCAA GCGGCGTATT GAAGCGTGTC CGAAACTCGG CTCGTTGCAG AGCATCAACC GCGCGCTAAG CGAGCTGCTG CATTCGGAAC AGAGCCTGAA TTCGCAGATC GCCCAGATCA TTCGCCGCGA CCCTTCGCTG ACCGCGCGGC TGCTGCGGAT GGTGAACTCG GTGTACTACG GGCTCTCCGC GCAGATCAAC AACATCGAGG AGGCGGTCTT TTATCTCGGG CTGCGACAGA TTCGCGAGCT CTCCATGGCC ACGCCCGTGA TCGAGGAGCT GGAAAAGCTC CAGACCCACT CTGTCACGCT CCCGTGGAAG GAGCTCTGGA ATCACAGCAT CGCCACGGCG ATCCTCACGC GCGAAATCCT GAGCGCGACG ACTTTTCAGA TCGACGATGA CACCGACTAC CTGATCGGCC TGCTGCACAA CGTCGGGAAG GTCATCATGG CGAATGCGTT TCCCGACGAA CTCCAGCAGT TGATCGGCAT GCACGCGCAT ACGCCCGCGG CCTTTTGCCG GCTCGAACGC GAGCTGATCG GATGGGATCA TGCGAAGATC GGCGCGTATT ATCTGGAGCA GCATCGCATC TCGGATGAGA TCATCACCGC CGTGCTGCAC CACAACGACC CGGCTCGCGC GCCCCAGCAT CAGATGTTCG CTGCCGCGGT TCAAGTGGCC GATCACGTCG TTCGGCACGC CGGCATCACC GGCGGTTTCG AATCGGTCGC ACCGGTGGAA CACGAAGCCT GGCTCAAGCT CGACGGCTGG CGCATTCTCT ACGGCGCCGA AGGGCCGGAA GGCATGCTCG CCCGCGCCGC GCTCGCCAAC ACCCTGAATC GGCTGCCGTC GATGTTGCAG GGTTTGCTGT GA
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Protein sequence | MLLDPPLLES MSPPPARKAP YAEAVIKRRI EACPKLGSLQ SINRALSELL HSEQSLNSQI AQIIRRDPSL TARLLRMVNS VYYGLSAQIN NIEEAVFYLG LRQIRELSMA TPVIEELEKL QTHSVTLPWK ELWNHSIATA ILTREILSAT TFQIDDDTDY LIGLLHNVGK VIMANAFPDE LQQLIGMHAH TPAAFCRLER ELIGWDHAKI GAYYLEQHRI SDEIITAVLH HNDPARAPQH QMFAAAVQVA DHVVRHAGIT GGFESVAPVE HEAWLKLDGW RILYGAEGPE GMLARAALAN TLNRLPSMLQ GLL
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