Gene Oter_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0462 
Symbol 
ID6208228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp545624 
End bp546565 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content62% 
IMG OID641690084 
Productputative signal transduction protein 
Protein accessionYP_001817352 
Protein GI182412286 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.540815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCG ATCCGCCTCT GCTCGAATCC ATGTCTCCTC CACCCGCCAG GAAAGCACCC 
TACGCCGAGG CGGTCATCAA GCGGCGTATT GAAGCGTGTC CGAAACTCGG CTCGTTGCAG
AGCATCAACC GCGCGCTAAG CGAGCTGCTG CATTCGGAAC AGAGCCTGAA TTCGCAGATC
GCCCAGATCA TTCGCCGCGA CCCTTCGCTG ACCGCGCGGC TGCTGCGGAT GGTGAACTCG
GTGTACTACG GGCTCTCCGC GCAGATCAAC AACATCGAGG AGGCGGTCTT TTATCTCGGG
CTGCGACAGA TTCGCGAGCT CTCCATGGCC ACGCCCGTGA TCGAGGAGCT GGAAAAGCTC
CAGACCCACT CTGTCACGCT CCCGTGGAAG GAGCTCTGGA ATCACAGCAT CGCCACGGCG
ATCCTCACGC GCGAAATCCT GAGCGCGACG ACTTTTCAGA TCGACGATGA CACCGACTAC
CTGATCGGCC TGCTGCACAA CGTCGGGAAG GTCATCATGG CGAATGCGTT TCCCGACGAA
CTCCAGCAGT TGATCGGCAT GCACGCGCAT ACGCCCGCGG CCTTTTGCCG GCTCGAACGC
GAGCTGATCG GATGGGATCA TGCGAAGATC GGCGCGTATT ATCTGGAGCA GCATCGCATC
TCGGATGAGA TCATCACCGC CGTGCTGCAC CACAACGACC CGGCTCGCGC GCCCCAGCAT
CAGATGTTCG CTGCCGCGGT TCAAGTGGCC GATCACGTCG TTCGGCACGC CGGCATCACC
GGCGGTTTCG AATCGGTCGC ACCGGTGGAA CACGAAGCCT GGCTCAAGCT CGACGGCTGG
CGCATTCTCT ACGGCGCCGA AGGGCCGGAA GGCATGCTCG CCCGCGCCGC GCTCGCCAAC
ACCCTGAATC GGCTGCCGTC GATGTTGCAG GGTTTGCTGT GA
 
Protein sequence
MLLDPPLLES MSPPPARKAP YAEAVIKRRI EACPKLGSLQ SINRALSELL HSEQSLNSQI 
AQIIRRDPSL TARLLRMVNS VYYGLSAQIN NIEEAVFYLG LRQIRELSMA TPVIEELEKL
QTHSVTLPWK ELWNHSIATA ILTREILSAT TFQIDDDTDY LIGLLHNVGK VIMANAFPDE
LQQLIGMHAH TPAAFCRLER ELIGWDHAKI GAYYLEQHRI SDEIITAVLH HNDPARAPQH
QMFAAAVQVA DHVVRHAGIT GGFESVAPVE HEAWLKLDGW RILYGAEGPE GMLARAALAN
TLNRLPSMLQ GLL