| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0433 |
|---|
| Symbol | |
|---|
| ID | 6208410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 507203 |
|---|
| End bp | 509395 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690055 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001817323 |
|---|
| Protein GI | 182412257 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.645464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTC CTCCGGAGTC CTTTCGGGCG CTGGACGATG TAATCAATCG TCTCGCTGCT
GAGTCTGTTC TCGCGCAGAG CGGCCGCGAT GACGGGCTGG TGCCGTCGTA TAGCCTGCTC
GGCGACTTGC GCGAGCTTTG CGCGGCGGAG CCCTTGTTGC TCGAGCCACT GGTGGCCATG
CATGTGGCGC TGGAAAAGCT GCTCGACACC GCGCACCCGT TCGATGACGC GACCCTCGGC
AAACTGCGCA GCCTGGTGGA GTGGTTGCCC ACGGCGGTCG ATGCACTGCG AATCGGCGCG
GTGCCTCCGC CTCCGCCCGG CAAGGCCGCG GTTGCAGCGG CGACGGCGGC GGCGAACAGC
GAGGCGAGCG AGGCGGATCA TGCGGCGGCG GCGGACGTGC TGCTGACGCT CAATCTCGAG
GAAAACCAGG AGCTGCTCAG CGAGTTCTAC GGCGAGGCGG TCGATCATCT GCAGCAAATT
GAAGCGGCGC TGCTCGTGCT CGATCACGAA CCCGAGAATC CTGAGGCACT GAATTCGATC
TTTCGCTCGT TCCACACGAT CAAAGGCAAC GCCGGCTTCC TCGGCCTGGT GCCGATGCAC
ACGCTGGCGC ACGAGGTCGA GTCGCTGTTG GATTTGGCGC GCAATCACAA GCTGAAGCTC
AATGCGGCGA TCATCACCGA GATCTTGCGC AGCCGCGACG CCCTGCAAGC CTTGACGCAG
CAGGTGGCGA AGGCGCTGGA AAAGGGCCAG CTGCCGACGC AGATCATCTC AGTCTCTCAC
CTCATCCGCG CGGTTCACCG GCTGTCGGAG TCGCCGGCCG GCGGACTGCA AGCGGAGGCT
CCCGCGCCGC CGGCGCCCGT GGCCGAGAAA TTTGTGGAAG TGCCGTTGCC GCCCGAGCCC
TCCGCCGTGC TTCCGCCCGT GCCGGTGGCC GCGGAGCCAG TGACCGCGCA TGGCGCCGCG
CCTGGCCCGG CCCCGGTGGC CCCATTCCCC GCGCCCGCGC CGGCGGCGAG CGCCACCATC
GCCAAGGTCG CCAGCGGCGG TACGGTGCGG GTGAATACCG AAAAGCTCGA TTCCCTCATG
GACGTGGTGG GCGAGCTCGT GATCGTGCAG AGCCAGCTGC TGGAGACGGC CCGGCATCAC
AACGACGTGA CCGGCTCACC GCTGCAGCGC AACGTCGCGC AGCTTTCGCG CATCACCAAG
GAGCTGCAGC ATACGGCGAT GTCGCTGCGG ATGATTCCCA TCAAGCAGAG CTTCCAGAAA
ATGGAACGGC TGGCCCGCGA CCTGGCCCGC GACTTCGGCA AAAAGGTTTC CTTCGTCACG
AGTGGCGAGG ACACCGAGCT CGATCGGACC GTGGTCGAGG AGATCGGCGA TCCGCTGGTC
CACATGGTGC GCAATGCGCT CGACCATGGG CTGGAGCCGC CCGCCGAGCG CGTCGCCGCC
GGCAAGCCGG AAACGGGCGT GCTGCACCTC AAGGCGTATC ATCAGGGCAG TAACATCGTC
ATCGAACTCC AGGACGACGG TCGCGGCATC AATCCGGACA AGATCTACCA AAAAGCCATC
GAAAAAGGAC TGATCGCCCC CGGCACCACG CTGGCGAAAG AAGAGATTCT CGCGCTCGTA
TTCGCGCCCG GATTCTCGAC CGCGGAGAAG GTCACGGCGG TTTCCGGCCG CGGCGTCGGC
ATGGACGTGG TCAAGCGCAA CATCGAAAAG CTTCGCGGTA AGATCGAGAT CAACTCCGAG
GTGAAGCGCG GCTCGACCTT CAAGGTCAAG TTGCCGCTCA CGATGGCGAT CATCGATGGG
CTCGTGGTGC GCGTCGGCGA AGACCGCTTC ATCCTGCCCA GCACGTCCGT GCAGCGCGCG
CTGCGGCCCT CGCGCGAAAG CGTTGCCACC GTGCAAGGCC AGGGCGAGGT GCTCGACCTG
CGCGGCCGGC TCGTGCCGAT TCACCGGCTG CACCGGCGGT TTGGCATTCC ACATCAGGCG
GAGAATCCAT GGGAGGGCAT CGTGGTCATC GTGGAGCACT CTGGAAAAAT CTCGGCGCTG
TTGGTCGACG AAATGGTCAG CAAGCAGGAA GTCGTCATCA AGAACCTCGG GGCTTTCATG
CAGGGGCTGC CGGGTGTCGC GGGCGGCGCG ATTCTCGGCG ATGGCAACAT CGCGCTCATC
CTCGATCCGG CCACGCTCCT TCAGGCGGCT TGA
|
|---|
| Protein sequence | MPIPPESFRA LDDVINRLAA ESVLAQSGRD DGLVPSYSLL GDLRELCAAE PLLLEPLVAM
HVALEKLLDT AHPFDDATLG KLRSLVEWLP TAVDALRIGA VPPPPPGKAA VAAATAAANS
EASEADHAAA ADVLLTLNLE ENQELLSEFY GEAVDHLQQI EAALLVLDHE PENPEALNSI
FRSFHTIKGN AGFLGLVPMH TLAHEVESLL DLARNHKLKL NAAIITEILR SRDALQALTQ
QVAKALEKGQ LPTQIISVSH LIRAVHRLSE SPAGGLQAEA PAPPAPVAEK FVEVPLPPEP
SAVLPPVPVA AEPVTAHGAA PGPAPVAPFP APAPAASATI AKVASGGTVR VNTEKLDSLM
DVVGELVIVQ SQLLETARHH NDVTGSPLQR NVAQLSRITK ELQHTAMSLR MIPIKQSFQK
MERLARDLAR DFGKKVSFVT SGEDTELDRT VVEEIGDPLV HMVRNALDHG LEPPAERVAA
GKPETGVLHL KAYHQGSNIV IELQDDGRGI NPDKIYQKAI EKGLIAPGTT LAKEEILALV
FAPGFSTAEK VTAVSGRGVG MDVVKRNIEK LRGKIEINSE VKRGSTFKVK LPLTMAIIDG
LVVRVGEDRF ILPSTSVQRA LRPSRESVAT VQGQGEVLDL RGRLVPIHRL HRRFGIPHQA
ENPWEGIVVI VEHSGKISAL LVDEMVSKQE VVIKNLGAFM QGLPGVAGGA ILGDGNIALI
LDPATLLQAA
|
|---|
| |