| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0424 |
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| Symbol | |
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| ID | 6208706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 499218 |
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| End bp | 500810 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690046 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001817314 |
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| Protein GI | 182412248 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAT TTCTGCAATC CCTCCTCGAG CTTTGGAAAC AGCTCGGACT CAACCAACGA
GTTTCGTTGG TCGTCGCCGC GCTCGCGGTC GTCGCCGGTC TGATCACGGT CGTCCTGTGG
TCCCGCCGGC CCGACTACCA GCTGCTCTAC GCGCGGCTCA GCGAGAAGGA CGCCGCATCG
ATCATCGGCC AGCTGCAGAC GCAGAACATT CCGCACATCG TGACCGCCGG CGGCACCGCC
GTGCAGGTTC CCTCCGATCA GGTCTACAAG CTCCGGATGG ATCTCGCCTC GAAAGGCCTG
CCGAGCGGCG ATGGCGTGGG GTTCGAGATT TTCGACAAGG GGCAGTTCGG CTTGTCCGAT
TTCGTGCAGC GCACGAACTA CCTCCGGGCT GTCCAAGGCG AACTCGCCCG GACCATCATG
CAGCTGCAGG GCGTGCGTGC CGCCCGCGTG ATGATCGTCC AACCGGAAAA CCGGCTGCTG
CTCACGGATC AAAGCGTCAA ATCCACCGCT TCCGTCTTCG TCGATGTGGG TGGCAAGCGG
CTCGAAACCG ACCAGGTGAA CGCGATCCGC CACCTCGTCG CCAACGCGGT GCAGGGGCTC
GCCCCGGATC AGGTCGCGGT CGTCGACAAC CGCGGCCATG TGCTTTCCGA GGAGCTGAAA
CAGGATCCCA CGCTCGGCAC GGCTTCGTCG CAGATCCGCT ATCGCCAGCA GGTCGAGGAC
TATTTCGCCA AGAAGGTCGA GACGATGCTC GCCGCCGTGA TCGGCCCCGG CAATGCCGTC
GTCCGCGTAT CCGCGGAAAT CGACACGGAG GCCGTCGCCA TCACGGAGGA ACGCTTCGAT
CCCGAGGGCC AGGTGGTGCG GACCCAGACC GTGACCGAGG ACACTTCCTC TTCGGCCGAG
TCGCGCTCGG CGGGTGGCGT CGTGGGCGTG AGCGCGAATG TGCCCGAGAA GAACCCTGGC
ACGGAGGCCG CGCGCCCCGT CTCGAACACC GAGCAAAGCC GGAAGAATCG CTCCACGACT
TACGAAATCA ACCGGACGAC GCTCAACACG ACGCGCAATC CGGGCAGCGT CAAAAATCTC
ACGGCGGCGG TGTTCGTCGC GCCGCGCCTG GCCGCGCCCG CCGCCGCCGG GGCCGCGCCG
GGCGAACCGC AGCGGCGCAG CGCGGAAGAG CTCAACGCCC TCCGCCAGCT CGTGGTCAAC
GCCCTCGGCC TCAAGATCCC CGCCGGCCAG TCGCTCGACA CCGTGGTTTC GCTGCAGGAA
ACGCCCTTCC AGAGCGCCGA GGAAATTCCG GCCCAGATCG CGGCGATCGA GCAGGAGAAC
CGCTGGCAGG GTTGGATCGA GGCGGGCAGC CGATGGATCG CCGTGGTCGC CGCGGCCGCG
GTGTTCCTCG TGTTCTGGCG GATGCTGCGC CGGCAGAAGC CCGAGCCGGT GCCGATTGAA
GTTCTCTCCC TCTCTCCGGA AGCGGCCACG CGTTCGCTTC CCACGTCCAA CGGCGTCACC
CCCGATCTGC TCAACGAGTT GATCCGCCAG AAACCCGCCA ACATCGGCGT CGCCCTGCGC
GACTGGGTGT CGGCGAGTTC GACGAAAAAC TAA
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| Protein sequence | MKKFLQSLLE LWKQLGLNQR VSLVVAALAV VAGLITVVLW SRRPDYQLLY ARLSEKDAAS
IIGQLQTQNI PHIVTAGGTA VQVPSDQVYK LRMDLASKGL PSGDGVGFEI FDKGQFGLSD
FVQRTNYLRA VQGELARTIM QLQGVRAARV MIVQPENRLL LTDQSVKSTA SVFVDVGGKR
LETDQVNAIR HLVANAVQGL APDQVAVVDN RGHVLSEELK QDPTLGTASS QIRYRQQVED
YFAKKVETML AAVIGPGNAV VRVSAEIDTE AVAITEERFD PEGQVVRTQT VTEDTSSSAE
SRSAGGVVGV SANVPEKNPG TEAARPVSNT EQSRKNRSTT YEINRTTLNT TRNPGSVKNL
TAAVFVAPRL AAPAAAGAAP GEPQRRSAEE LNALRQLVVN ALGLKIPAGQ SLDTVVSLQE
TPFQSAEEIP AQIAAIEQEN RWQGWIEAGS RWIAVVAAAA VFLVFWRMLR RQKPEPVPIE
VLSLSPEAAT RSLPTSNGVT PDLLNELIRQ KPANIGVALR DWVSASSTKN
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