Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0372 |
Symbol | |
ID | 6208772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 447426 |
End bp | 448493 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689994 |
Product | radical SAM protein |
Protein accession | YP_001817262 |
Protein GI | 182412196 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.187269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCCCT CCCTTGCCGA GCTGTCCGTC GACGATCTGG CGTCGGTGCT GGCGCAGTGG GGCTACAAGC GAAGCCACGC CGGGCGGGTG CTGCGGGAGT ACTATGCGCG GTGCGGTGAG CTGACGGAGG CCGGCCGGCC CTGGCCGGCG GGCTTGCTCG AGCGGCTGCG GATCGAGTTT GCACCGGGCG GCACCGCGCT GGCCGCGCGG CAGGTGGCGG CCGACGGCAC GACGAAGCTG CTGCTACGGC TCGCCGACGG GCGCACGGTG GAAGCGGTGT TGATGCCGGA CTACCGCGCC GATCGGGCGG CCGGTTGCCT GTCTTCGCAG GTCGGATGCG CCATGGGCTG CGATTTCTGC GCGACCGCGC AATCGGGTTT CGAGCGCAAC CTCACCGCGG GCGAAATGGT CGAGCAGTTT CTCGCGCTGC GACGCGAGGC GGCCAGCGCC GGGCGGAAGC TGCAAACCGT CGTGTTCATG GGCATGGGCG AGCCGCTGCT GAATCTCGAC GCCGTGCTCA CGGCGGTGCG GCGAATCGCC GACAACACCT ATGGTGGGCT CGGCTGGCGG CAGGTCACCG TCTCCACCGT CGGGCTCGTG CCAGGCATCG ACGCGCTGAC CGCGGCCGAT CTGGGGATCA ATCTCGCGGT GTCGCTGCAC GCGCCGGACG ATGCCACGCG CGCCGCGCTG CTGCCCGCCG GCCGGCGGTT CGCCATCGCC GACATCCTTG CAGCGGTTGA CCGGTTCCAA GCGAGTCGCG GCCGGCCCGT GATCATCCAA TATTGTTTGC TCAAGGGCGT GAACGATTCC GCGGCGCATG CGCGCATGCT GGCCGCGGTG ATCGGATCGC GGCGGATGCA CGTGAACCTG CTGCACTACA ATCCGACCGG ATTGAGCCTG CGCGGCGTGC GCTACGAGCC GAGTGGCGAC GAGGCGGCGG CGCAGTTTTT GGCCGAGCTG CGTGCGCGCG GCGTGGTCAC GCACCTGCGC CGCTCGCGCG GCCCTGACAT CGACGCCGCC TGCGGACAGC TCCGGGCCAA GCGCGGAGAG CTGAGCGTCC AGAGTTGA
|
Protein sequence | MRPSLAELSV DDLASVLAQW GYKRSHAGRV LREYYARCGE LTEAGRPWPA GLLERLRIEF APGGTALAAR QVAADGTTKL LLRLADGRTV EAVLMPDYRA DRAAGCLSSQ VGCAMGCDFC ATAQSGFERN LTAGEMVEQF LALRREAASA GRKLQTVVFM GMGEPLLNLD AVLTAVRRIA DNTYGGLGWR QVTVSTVGLV PGIDALTAAD LGINLAVSLH APDDATRAAL LPAGRRFAIA DILAAVDRFQ ASRGRPVIIQ YCLLKGVNDS AAHARMLAAV IGSRRMHVNL LHYNPTGLSL RGVRYEPSGD EAAAQFLAEL RARGVVTHLR RSRGPDIDAA CGQLRAKRGE LSVQS
|
| |