| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0357 |
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| Symbol | |
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| ID | 6204791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 425447 |
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| End bp | 426103 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689979 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001817247 |
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| Protein GI | 182412181 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0421095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAGG AATCCGAGCG CAGCAGCGAT TCCCTGCCGA CTCGTTTGAG CCTGCTCGGC
CGACTGGCGG ACCTTTCGGA CAACCGGAGC TGGCGCGAGT TTTACCTCAC CTACGAAGCG
CACATTCGCG GCCTGGCGCG GCGTCGCGGA CTACCGGAAC AGGATGCGGA GGAGGTCGCG
CACGACGTGC TGCGACGCGT GGCCGAGACG ATCCGCAACT ATCAGCCTTC GGATCGCCGC
GGGGCGTTTC GCCGCTGGCT CTTCCAACTC ACCCGCTGGC GCGCGTCGGA CCGGCTGCGG
CAGCGCCGAC GCGATGAACC GCCGGTTCGG ATTTCCCTCG ACCCACCGGC CGACGAGCCG
GGCGGCGGGG AACGCGCGCC GTTCTTCGTG CCAGCCGCTC CGCCGCAATT GGACCAGCAG
TTCGAGACGG AGGCGCAGCG CTACGCGCTC GCCACCCTGC TGAGCCGGCT CGAGCGCACC
GTATCGAAAA AACACCTGCA GATATTTCAG ATGGTGATGC TCGACGACGT GCCGGTGCCG
CGCGTCGCCG AGTTGTTCCG CACCCAGCCC GCCGCCGTCT ACGTGATCAA GCACCGCGTA
CTGGAAAAAT TGCGCGCCGA GGTCGCGGAA CTCGGTCCCG TCCTGGAGCT GTCATGA
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| Protein sequence | MNEESERSSD SLPTRLSLLG RLADLSDNRS WREFYLTYEA HIRGLARRRG LPEQDAEEVA
HDVLRRVAET IRNYQPSDRR GAFRRWLFQL TRWRASDRLR QRRRDEPPVR ISLDPPADEP
GGGERAPFFV PAAPPQLDQQ FETEAQRYAL ATLLSRLERT VSKKHLQIFQ MVMLDDVPVP
RVAELFRTQP AAVYVIKHRV LEKLRAEVAE LGPVLELS
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