| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0283 |
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| Symbol | |
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| ID | 6208704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 316157 |
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| End bp | 317728 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689905 |
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| Product | RNA binding metal dependent phosphohydrolase |
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| Protein accession | YP_001817173 |
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| Protein GI | 182412107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.333798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.501538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCAG CCGACTTCGC GTTTCTGATA GCCGAGAGCG ACCTGTTCGA TTGGTCGCTC
ACGGTGGCAT TGGTCATTGG CGGGGCACTG GGTTTTCTGG TCGTCTGGGC GTTCACGCGG
CACACGCGCC GGATGGCGCA TGAGCAGGCG GCGGAACTCG AAGAGGTGGC GCGCCGCGAG
GCAGCCGTGG CCGCGGAGGA GATTCGCCAG AAAGCCGAAG CGGAAATTCA GGAGAAACGC
GCCGAGCTGA ACCGCGATTT CGACCGGCGC GAAATCGAGA GCGAGGTGCG GCTCCGCGAA
ATCCGCGCGC ACGAGGAATC GCTCGCGCTG CTCGACTACC AACTCGAGCA GCGGCAGGAG
CGGCTCAACC GCGAGACCGC GGCGATGCGG CAGGCGCGCG ATGCGATCCG GGCGCTGTCG
AAAAGCGTGC GGCAGCGGCT CGAGGGCGTG TCGCAGATGG ACGCCGAGTC GATCCGCCAG
GCGCTGCGCG AGGAGGTGCA GCTCGAATGC CAGGACGAAC TCCGCGCACT GCGACGCGAG
ATCATGGAGA AGTCCGAGCA GGACCTGCAG ACCGAAGGCC GCCGAATCAT GATCGCCGCG
ATGCAGCGGC TCGCCAGCAA GCCGAACAAC GACCTGACGT CGACCATCGT GTCGCTGCCG
AACGAGGACA TGAAAGGCCG GATCATCGGC CGCGAAGGGC GCAACATCAA AGCGTTCGAG
GCGGCGACGG GCGTGACCGT GCTCATCGAC GAGTCGCCTC AGACGGTCTT GATTTCATCG
TTCGACCCGA TCCGGCGCGA AGTGGCGCGC GGGGCCCTGG AGGCGTTGAT CAAGGACGGC
CGGATTCATC CCGCGACGAT CGAGGAGTTC GTGAAGCGTG CGCACGAGGA GATCGAGCTC
TCGGCGATGC AGGCCGGCGA GGACGCGGTG ACGCGGCTCA ATATCAACGG GCTGCACCCG
GAAATCATCA AGCTGCTCGG CAAACTGAAA TTCCGCTTCT CCTACAACCA GAACGTGCTC
GATCACTCGG TCGAGACCGC GTCGCTGGCG TCGATGATTG CGAGCGAGGT CGGGCTCGAT
CCGAATGTCG CGAAGCGCGC GGGGCTGCTG CACGACATCG GCAAGGCGGT GAACGCCGAC
TACGAAGGCA GCCATGCGCA CATCGGCGCG GAATTTATCC GGCGCTATGG CGAGACGCCG
ATCGTGGTGA ATTCGGTTGC GGCCCATCAC GAGGAGGTGA AGCCGGAGAC GGTTTACGCC
GGGTTGGTGA TTTTGGCCGA TACGATCTCC GCCACGCGGC CGGGCGCGCG CGCGGAATCG
ATGGCAGGTT ACATCCAGCG GCTCGGCCGG CTGGAAAAAC TGGCGATGGC GATCGACGGC
GTGCAGCAGG CGTTTGCCAT TCAGGCCGGC CGGGAGATTC GCGTCGTGGT GTCGCCGCAA
ACCGTGACGG ACGATCGGGC GCGGGAGATC GCGAAGGAGC TGCGCAAGCG GATCGAGGCC
GAGCTGCAGT ATCCGAGCAC GATCAAGATC ACGGTCATCC GCGAGCAGCG GTTCACGGAG
ACCGCGACCT GA
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| Protein sequence | MSAADFAFLI AESDLFDWSL TVALVIGGAL GFLVVWAFTR HTRRMAHEQA AELEEVARRE
AAVAAEEIRQ KAEAEIQEKR AELNRDFDRR EIESEVRLRE IRAHEESLAL LDYQLEQRQE
RLNRETAAMR QARDAIRALS KSVRQRLEGV SQMDAESIRQ ALREEVQLEC QDELRALRRE
IMEKSEQDLQ TEGRRIMIAA MQRLASKPNN DLTSTIVSLP NEDMKGRIIG REGRNIKAFE
AATGVTVLID ESPQTVLISS FDPIRREVAR GALEALIKDG RIHPATIEEF VKRAHEEIEL
SAMQAGEDAV TRLNINGLHP EIIKLLGKLK FRFSYNQNVL DHSVETASLA SMIASEVGLD
PNVAKRAGLL HDIGKAVNAD YEGSHAHIGA EFIRRYGETP IVVNSVAAHH EEVKPETVYA
GLVILADTIS ATRPGARAES MAGYIQRLGR LEKLAMAIDG VQQAFAIQAG REIRVVVSPQ
TVTDDRAREI AKELRKRIEA ELQYPSTIKI TVIREQRFTE TAT
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