| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0230 |
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| Symbol | rpsL |
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| ID | 6206238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 255383 |
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| End bp | 255763 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641689851 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001817121 |
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| Protein GI | 182412055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACCA TCAATCAGCT CGTGCGCAAA GGCCGCCGGA AAGTGCGCAC CAAGTCCAAA
TCGCCCGCGT TGGACGGCAA TCCGTTCCGC CGTGGCGTGT GCGTGCAGGT CATGACCCGC
ACCCCGAAAA AGCCGAATTC GGCCATTCGT AAGGTCGCGA AGGTCCGGCT GACCAATGGC
AACGAGGTGA TCTCCTATAT TCCGGACGAA GGTCACAACC TGCAGGAGCA CTCGATCGTG
CTCGTGCGCG GCGGCCGCGT GAAGGATCTC CCCGGCGTCC GTTATCATAT CGTGCGCGGC
ACGCTCGACG CCACCGGCGT CGAGAAGCGT CGCCGGTCCC GCTCGAAATA CGGCGTCAAG
CGTCCGAAGG CCGCCAAGTA A
|
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| Protein sequence | MPTINQLVRK GRRKVRTKSK SPALDGNPFR RGVCVQVMTR TPKKPNSAIR KVAKVRLTNG
NEVISYIPDE GHNLQEHSIV LVRGGRVKDL PGVRYHIVRG TLDATGVEKR RRSRSKYGVK
RPKAAK
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