| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0105 |
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| Symbol | |
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| ID | 6205613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 129852 |
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| End bp | 131741 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641689726 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001816996 |
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| Protein GI | 182411930 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.441144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTGT CAGAACGCGC GGCGCTCCCT CTGTGTTTGG CCAACGCAAT CATGGCCCAA
GCTTACACCG AAGCGAGTAT CAAGACCCTT TCGTCCACCG AGCACATCCG GCTGCGGCCC
GGCATGTATA TCGGCCGGCT CGGCAACGGC GCTCATGCCG AGGATGGCAT CTATGTGCTG
TTGAAGGAGT CGATCGACAA CTCGATCGAC GAATTCACGA TGGGCTACGG CCGGAAGATC
GAAATCGAGC TGCAGGACCG GATGGTGCGG GTGCGGGACT ACGGTCGGGG CATTCCGCTC
GGCAAGGTGC TCGAATGCGT CTCGATCATC AACACGGGCG CGAAATACGA CAGCGAGACC
TTCAAGAAAG CGGTGGGCCT CAACGGGGTC GGTCAGAAGG CGGTGAACGC ACTGTCGTTT
TCGTATCGTG CACAGGCGTT TCGCGACGGG CAGACCAAGC TCGTGGAGTT TGCGCAGGGC
AAGCTGCGCA AGGATCACAA GATCGCGAAG ACGACGGAGC GGAACGGCAC GCTCATCGAG
TTCACTCCGG ATGAGGCGCT GTTCGGAAAG GATTTCAAGT TCCGGCCGGA GTTCATCGAG
GACATGCTAT GGAACTATGC CTTCCTGAAC CGCGGGCTCA CGCTCACGTT CAACGGCAAG
GCGTTCCGTT CGGAAAACGG ACTGAAGGAC CTGCTGCAAA AGAATCTGAG CGGCGAGCCG
CTTTATCCGA TCATCCATCT CGAAGGCGAG GACATGGAGG TGGCGTTCAC CCATGGCGCG
CACTACGGCG AGGAGTATTA CTCGTTCGTG AACGGCCAGC ACACGACGAT GGGCGGCACG
CATTTGGCGG CGTTTCGCGA AGCGCTGGTC GAGACCGTGC GGAACTTCTT CAAGCGCGAC
TACGATGCCG CCGACGTGCG GCAGTCGATC GATGCGGCGG TGTCGGTGCG CGTCATGGAG
CCGGTGTTCG AATCGCAGAC CAAGACGAAA CTCGGCTCGA CCGATATCGC GCCGGGTGGG
CCATCGATCC GCGACTTCAT CGGCAAGTTT GTCCAGCAGT CGCTCGACGG TTATCTGCAC
AAGAACCGGG AGACGGCGGA CGCGTTGCGG AACAAGATCG AGGAGAGCGA GCGCGAGCGG
AAGGAGCTCG CGGGCATCCG CAGTCTCGCG CGGGAACGCG CAAAGAAAGC GTCGCTGCAC
AACCGCAAGC TGCGCGACTG CCGGCTGCAC CTGGGCGATC GCAACGAACG CGCGGAGGAA
AGCACGCTGT TCATCGTCGA AGGCGACTCG GCGGCCGGCT CGCTCACCGC GACGCGCGAC
GTGCAGACCC AGGCGGTGTT CGCGTTGAAA GGCAAACCGC TGAACACCTT CGGGCTCTCG
AAAAAGGTGA TCTACGAGAA CGAGGAGTTC CACCTGCTGC AATCAGCGTT GAACGTCGAG
GACAGCATGG ACGGGCTGCG CTACAACCGG GTCGTGATCG CGACCGATGC GGACGTGGAC
GGCATGCACA TCCGGCTGCT GCTGATTTCG TTCTTCCTGC AATTCTTCCC GGATCTGATT
CGGAACGGAC ATCTCTTCAT TTTGGAGACG CCGCTGTTCC GCGTGCGCAA CAAGAAGGAG
ACGATCTACT GCTACTCCGA GGAGGAGAAG CAGGCGGCGA TGAAGAAGCT CGGCGCGAGC
CACGAGATCA CGCGATTCAA AGGGCTCGGC GAAATCTCGG CGGGTGAGTT CAAGGATTTT
ATCGGCGAAG CCATGCGGCT CGAGCCGGTG ACGCTGGCGC ATCTCAACGA CAGCAACGAG
CTGCTTGGCT TTTTCATGGG CAAGAACACG CCGGAGCGGC AGGACTTCAT CATCGACAAC
CTCAAGGTGG AGAAGGATCT GGTGGCGTGA
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| Protein sequence | MRLSERAALP LCLANAIMAQ AYTEASIKTL SSTEHIRLRP GMYIGRLGNG AHAEDGIYVL
LKESIDNSID EFTMGYGRKI EIELQDRMVR VRDYGRGIPL GKVLECVSII NTGAKYDSET
FKKAVGLNGV GQKAVNALSF SYRAQAFRDG QTKLVEFAQG KLRKDHKIAK TTERNGTLIE
FTPDEALFGK DFKFRPEFIE DMLWNYAFLN RGLTLTFNGK AFRSENGLKD LLQKNLSGEP
LYPIIHLEGE DMEVAFTHGA HYGEEYYSFV NGQHTTMGGT HLAAFREALV ETVRNFFKRD
YDAADVRQSI DAAVSVRVME PVFESQTKTK LGSTDIAPGG PSIRDFIGKF VQQSLDGYLH
KNRETADALR NKIEESERER KELAGIRSLA RERAKKASLH NRKLRDCRLH LGDRNERAEE
STLFIVEGDS AAGSLTATRD VQTQAVFALK GKPLNTFGLS KKVIYENEEF HLLQSALNVE
DSMDGLRYNR VVIATDADVD GMHIRLLLIS FFLQFFPDLI RNGHLFILET PLFRVRNKKE
TIYCYSEEEK QAAMKKLGAS HEITRFKGLG EISAGEFKDF IGEAMRLEPV TLAHLNDSNE
LLGFFMGKNT PERQDFIIDN LKVEKDLVA
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