Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_4556 |
Symbol | |
ID | 5383039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009669 |
Strand | - |
Start bp | 92333 |
End bp | 93565 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640837232 |
Product | conjugation TrbI family protein |
Protein accession | YP_001373072 |
Protein GI | 153011859 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.451217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAGT CTCCCGAACT AGAAGCACTG GCGTCTGCCG ATGACGCCGG AGTCAGCAAC AAGAATGCAA AGCGGAATCA GACGGCTGCG ATGGCCCTAT TTCTGCTGGC CGGTGTAGCT ATGGCTTATT TCGTTCTCAA ACAGCCTTCC GAGAAGCCGC GCGATCTTGT GCGCGGTGAC GAGGAGTTCA GCACCACGTC GTTCAGACCG CCGTCTTTCG TGCGCGACCA GGATCAGCCT CCTGCTGCGC CCGAGCCCAA CATCATAAAT ATCCCGCCGC CTCCACCGCC ACCGGAGCCG GAGAAAGTCG ACACCACGAC GTTTAATGTC CCTCCCCCGC CTCCGCCGAC GGTCGCAGTG AAGGAACCCG ATCAGGCACC CACGCCGGAG ATCGTTGAAG AATTTCCAGA CCGGTTCAAA TCCAAACTTA TTCAGATGGA TCAAGCGCGA TCAGGCGGAG CAAATGGGGG ACTTGGTGGC GATAGTGGCG AAGGAACACC GACTGTTGCT GGCGAAGACA GAAACAGCAA GTTTCTAGCA ACGGCCTCGG CAATGGCCGA CCGTAATGCC AAGGCTACGA AAATCAAGCG CATCGACGCG GTTGTGCCGG AAGGCACGAT GATACCCGGT ATTCTCGAAA CCTCGATTGT AAGCGATCTA CCAGGCCAGG TTCGCGCCAT CACGTCAGAA GACGTCTACA GTTTTGATGG TCGTCGCATT CTGATTCCGA CCGGCACCCG CCTCATTGGT GAATATCAAA GCGACGTCAT GACAGGCCAG ACCCGCGTTT TCGTAGTCTG GACACGCTTG CTTAGAGATG ATGGTGTAAG CGTGCGCCTG AACTCCGTGG GAACCGACAG CCTTGGCCGT TCCGGCCTGA CCGGCATCGT CGACAAAAAA TGGCGTGAAA GGTTCGGCGC GTCCATCATG TTGTCTGTGG TGGGCGCGGG CGCTAGCTAT CTGACTGGTT TCGGCAGCGG GGAAGCCTTC GGTCGTAACA ACGATGATGC GAAACGGGGT GAAGAACTAG CCCGCGAAAC AATCGCCGAA ACATTCTCTC AAATGGCAAA TACCGCTCTG AGCGAGAACT TGCGTATCAA ACCAACAATC AGCGTCCATC AAGGCGAACG TATCTTCATA TTCGTGCGTC AGGACCTCGA TTTTTCGGCC ATGTACGACG ATCCCGTAAC AGAAGCGATG AAGGAAATTC AACGTGAACG CAGGGGCAAA TAG
|
Protein sequence | MKQSPELEAL ASADDAGVSN KNAKRNQTAA MALFLLAGVA MAYFVLKQPS EKPRDLVRGD EEFSTTSFRP PSFVRDQDQP PAAPEPNIIN IPPPPPPPEP EKVDTTTFNV PPPPPPTVAV KEPDQAPTPE IVEEFPDRFK SKLIQMDQAR SGGANGGLGG DSGEGTPTVA GEDRNSKFLA TASAMADRNA KATKIKRIDA VVPEGTMIPG ILETSIVSDL PGQVRAITSE DVYSFDGRRI LIPTGTRLIG EYQSDVMTGQ TRVFVVWTRL LRDDGVSVRL NSVGTDSLGR SGLTGIVDKK WRERFGASIM LSVVGAGASY LTGFGSGEAF GRNNDDAKRG EELARETIAE TFSQMANTAL SENLRIKPTI SVHQGERIFI FVRQDLDFSA MYDDPVTEAM KEIQRERRGK
|
| |