Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3088 |
Symbol | |
ID | 5382789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 403782 |
End bp | 405398 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640835765 |
Product | extracellular solute-binding protein |
Protein accession | YP_001371625 |
Protein GI | 153010411 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.902972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC AAAAGACAAC CATCTTGCGC CGTACCACAG CACTCGCACT TGTCGCCGGT ATGAGTGCTG CGACGTTCCC TGCTGAGGCC GCGTCGCCAC CGAACGCGCT TGTCATGGCG TGGAACATCG ACGCTATCAG CACTTTTGAC CCAGCACAGA TCGGTGAGGC GGCTACCAAC GAGATCATCC AGAATATCTG CGACCCCATG GTTGATTTCG ATCCGACTGA CGAGACCAAG ATCGTGCCGC AACTCGCCAA AAGCTGGGAC GTCTCGCAGG ACGGTCTGCA GATCACGTTC CACATGCGCG ATGACCTGAA GTTTGACAAT GGCGACAAGG CGACGGCGGG CGATATGGCC TGGTCGCTCC AGCGCGCAGT CAAGCTGGGT TTTGGCAATG CCGCGACGTT GACAGAATAT GGTTTCACCA AGGACAATGT GGACCATACC ATCTTGGCAC CTGACGACGA CACGGTCGTT TTCAAGCTGG ACAAGCCTTA TCCGGTCAAC CTCATTCTGG CAGCGATCGC TGCCAACCGG GTTGCCAGCC TTCTTAATCA GAAGGTGTTG ATGGAGAACC AGGTCGATAA TGACATGGGC AACAAATATC TGGCCACTCG GTCAGAATGC GTCGGCCCCT ACAAGTTGAT GCGGTGGAAC CCCGCCGAAG TGGTTATCCT TCAGGCGACC GACAATTACT GGGGAGAAGC GCCGAAGCTC AAACAGGTAC TGATCCGCCA TGTTTCAGAA GCGGGAACTC AACGGCTTCT GCTTGAAAAA GGTGACATAG ACATTGCTCG CGATCTGACG TCGGAGGACC TGCGCGATCT CGAAGCCCAG GATAAGGTGA CCGCTTCACG CTCGCTAAAG CCTTCGCTGT TCTATTGGAA TTTCAACAAT GCCGATCCGA TCTTCGCCAA TGAAAAGGTG CGCCTCGCAA TGCGCTATCT CATTGATTAC GAGGGCCTCG GCAAGACGGT CATCAACAAT GTCGGCGTGC CGCGTGCGAG CTTCGTGCAG TTAGGTGCTT TCGGTGCACT GGATGAGAAG GAAGGGCAGC CCTTCAAACT CGATGTGGAA AAGGCTCGTG AACTGCTGAA GGAAGCCGGT TACGAGAAGG GCTTCGAGAC GACGATGTTT ATCAGTACTG CGCCTTATGC GGCTCCGATT GCCCAGAGCA TTCAGGATGC CGCCGCCAAG GTCGGCGTGA AGATCAAGAT CGAACGCATG GCCAACGCGC AATTGTTCAG CCGCATTCGC GGTCGTGAGT TCCAGACGTC GCTGATGGGC TGGCAGACCA CCGTTCCGGA CGCGCATGGC AATGCTTCGC GTCAGATTTT CAATCCTGAT AACCGGGCTG AGGCCAAGCA GACCATGTAT CCGAGCTGGC GCGCGAGCTA TTTCAATGAA GCGGTCAACA AGGAGGTCGA CACGGCTTTG TTCGAGAAGG ACGAGGCCAA ACGCAAACAG ATGTATATCG ATCTGCAGAA GGAGATGATG GAGAAGGGGC CGCACGCCTT CATTTTCCAG ATCTATAATG TCGCTGGCGT TAACAAGGCT ATGAAGAACT GGAGCTGGAA CGGCTTCCGC GTCTACTACG ATCTGGCCGC GAAATAG
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Protein sequence | MQKQKTTILR RTTALALVAG MSAATFPAEA ASPPNALVMA WNIDAISTFD PAQIGEAATN EIIQNICDPM VDFDPTDETK IVPQLAKSWD VSQDGLQITF HMRDDLKFDN GDKATAGDMA WSLQRAVKLG FGNAATLTEY GFTKDNVDHT ILAPDDDTVV FKLDKPYPVN LILAAIAANR VASLLNQKVL MENQVDNDMG NKYLATRSEC VGPYKLMRWN PAEVVILQAT DNYWGEAPKL KQVLIRHVSE AGTQRLLLEK GDIDIARDLT SEDLRDLEAQ DKVTASRSLK PSLFYWNFNN ADPIFANEKV RLAMRYLIDY EGLGKTVINN VGVPRASFVQ LGAFGALDEK EGQPFKLDVE KARELLKEAG YEKGFETTMF ISTAPYAAPI AQSIQDAAAK VGVKIKIERM ANAQLFSRIR GREFQTSLMG WQTTVPDAHG NASRQIFNPD NRAEAKQTMY PSWRASYFNE AVNKEVDTAL FEKDEAKRKQ MYIDLQKEMM EKGPHAFIFQ IYNVAGVNKA MKNWSWNGFR VYYDLAAK
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