| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3036 |
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| Symbol | |
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| ID | 5381394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | + |
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| Start bp | 343018 |
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| End bp | 344748 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640835713 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001371573 |
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| Protein GI | 153010359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.246075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAG ATGATGACAA CAAGGATGGC AAGCGTCCGC ATGGCCGTGG AGGGCGCTCC
GATCGTCCCG CTCGGCCAGA TCGTGACACT CGTCCGCGCC GCGATGACGG CGGACGTGAC
AAGCCACGTA AATTCGGACC GCGCGACGCC GAGGGGCAAG AGGACACGGG CGAACGTATC
GCCAAGCGTC TGGCACGAGC AGGCATAGCT TCACGCCGTG AAGCGGAAAC GATGATCGCT
GCTGGCCGTA TTGCCGTGAA TGGCAAGGTG CTTGAGAGCC CTGCGGTCAA TGTCAAGCGC
ACGGATATTA TTACGGTCGA CGGCAAGCCA TTGAAGCAGA CCGAGCGTAC CCGTCTCTGG
CTTTATCACA AGCCTGCGGG TCTTGTGACG ACCAATCGCG ATCCTGAAGG TCGCCCAACG
GTTTTCGAGG CACTGCCTGC CGAGATGCCA CGCGTACTTT CAGTTGGTCG TCTCGACATC
AATACCGAAG GTCTGTTGCT GCTCACCAAT GATGGTGGTC TGTCGCGCGT TCTGGAGCTG
CCTTCCACCG GCTGGCTGCG CCGCTATCGC GTTCGCGCCC ACGGCAAGGT CACACAGGTA
CAGCTTGATG AGCTGAAGAA CGGCATTGCC GTCGATGGCG TCTTCTACGG CAGTATTGAA
GCAACGCTTG AGCGTGAGCA GGGTGCCAAT GTCTGGATCT CTATCGGATT GCGCGAAGGC
AAGAACCGTG AAGTAAAGAA TATTCTGGGC GCTCTTGGTC TGACTGTTGG ACGTCTTATC
CGCGTTTCAT TCGGTCCTTT CCAGCTCGGT GATCTTGAAG AAGGTGCAGT CCGCGAAATC
AAGGGACGTA TCCTGCGAGA TCAGCTTGGT GACAAGTTGA TTGAGGATTC AGGCGCGGAT
TTCGATGCGC CTGTTCTGAA CGAGTTTTCC AATGCCGCTG TTCAGGGACG GACTCGTCGC
GACGTGGAAG ATGAGGGCGA GGAAGGCGAA CGCCGGCGTG GCCCGCGCGA ACGTGAATGG
ATTTCCAGCA GTCCTCAGCG TCGTCGCGGT CGCGACGACA AGGGAGCCGA AAAGGTTGAA
CCGCGTCGTC GCGGAAACGC CAATGTCTGG ATGGCTCCAG GTGCGCGTCC AAAGGGCGAA
AATGCGGCTG CCAAGCCCGC CCGTGTCGAA CGTCAAGTTC CGCATCGTTC AGCGAAATTC
AGTGGCGATC TGCAGATGCG CCCGCGTCGG GCTGGTGATG AGGAGCAGGG ACGCGACGAA
GGTGGTGAAC GCCGCTATAA CAAGCGACCG GAAGGCCGCT TTGATAAGGA CGCTCGTCCA
CAGCGTCCGC GTCCGGAAGG AAACCGCTCG GAAGAGGGAC GTCCAGAGCG CCGTGAGCAG
CGTGAGGATG GACGCAAGGA GCGTCGTCCC GGCAAACGCG AGCGTGCAGA ATTGCGCGAC
GCGGAAGGCC GGACTGTAGA GCACGGTAAG GGCGGCTTCG AGGGCCGCAA GACGGGAAAG
CCGGGCGGAC CGCGTGGTGA AGGCCGTTTT GGTGCATCCG ATCGCGATAC GCGCTCAGGC
CCGCGCAGCA GCGGACCGGG TAATAAATCT CGTCGTTTTG ATGATGGTTC GAAGGATGGA
CCGCGTCGTG GACCAGGAAA CAAGCCGGGT GGTAAACCAG GTGGAAAGCC GGGTGGCAGC
AAGTCAGGCG GTGGCAGAAC TGGAGGCGGT GGTGCGGATC GTCGGCGGTA G
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| Protein sequence | MTKDDDNKDG KRPHGRGGRS DRPARPDRDT RPRRDDGGRD KPRKFGPRDA EGQEDTGERI
AKRLARAGIA SRREAETMIA AGRIAVNGKV LESPAVNVKR TDIITVDGKP LKQTERTRLW
LYHKPAGLVT TNRDPEGRPT VFEALPAEMP RVLSVGRLDI NTEGLLLLTN DGGLSRVLEL
PSTGWLRRYR VRAHGKVTQV QLDELKNGIA VDGVFYGSIE ATLEREQGAN VWISIGLREG
KNREVKNILG ALGLTVGRLI RVSFGPFQLG DLEEGAVREI KGRILRDQLG DKLIEDSGAD
FDAPVLNEFS NAAVQGRTRR DVEDEGEEGE RRRGPREREW ISSSPQRRRG RDDKGAEKVE
PRRRGNANVW MAPGARPKGE NAAAKPARVE RQVPHRSAKF SGDLQMRPRR AGDEEQGRDE
GGERRYNKRP EGRFDKDARP QRPRPEGNRS EEGRPERREQ REDGRKERRP GKRERAELRD
AEGRTVEHGK GGFEGRKTGK PGGPRGEGRF GASDRDTRSG PRSSGPGNKS RRFDDGSKDG
PRRGPGNKPG GKPGGKPGGS KSGGGRTGGG GADRRR
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