Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_2793 |
Symbol | |
ID | 5382814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | - |
Start bp | 50856 |
End bp | 55952 |
Gene Length | 5097 bp |
Protein Length | 1698 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640835469 |
Product | YD repeat-containing protein |
Protein accession | YP_001371331 |
Protein GI | 153010117 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTC TAGCATCTCA GTTTTACACG AGGGCGACGA ATTTTGCTTC GGCGCTTTCG GGTAACGTCG ACCCGCGCAT GGGGCAGTAT ACGATCAACC TGGCGATCGG CACATTGAAC GCCAATGACT TGCTAGGTCC CAGTATTCCC CTAGGGCTGA GTTACTCGCC TCAGAATACG GGCAATATGG GTTTCGGCAT TGGATTTTCG ATTGGCCTGT CCAGTTATGA CACGCAGCAG ACACTGTTGT CGTTATCGAG TGGAGAACAA TATTATACGG ATACGAATCT TATTCTGAAG CAAAACAGGC TTCAGGCAGT TTCGCTTCAG AATGACGGCA AAAACTACAA AGTCCTTTAC AAGAACGGCA CGGTTGAGCT TCTTGACGGG CCGGGCACTG CCAATGCCGT CAAGGTGACG CGAAAGATAT TCTCCCCTGA AGGCCGTTAT GTCTCCCTGA GCTGGAATTA CAGCCAGAAC CCGCCGCGCT TGCAATCTAT TCAGGATGAA GCAGGAACAT CTCTGCTTTC GATCAAGTAT CCTGATGCCA GCAGTCTCCA GACGGTCCTT TCTGTACGGC CGGGAACAAC AGAAGGATAC AATGTCACTC TATCATTTGA TAATGGCTAT TTGCTCAATG CGAGTTGTGA CGCACTGGGT GGGTCAGACA AGACCTTGGA GTGGGCAATA GATTATACCG GCTTCGGCTC CAAGTGGCCT GGCCAATGGG CATACAAGCT GACAAGCCCC GGCGGTCTGA TTGAAACAGC CACTTATAGC TCAGGTCACC GCTTTCCCAC GAATGCAACC TCTATGCAAA ATTTGAGGCT GCCTTATGTC ACTCAGTTCA CGCGCCAGCC AGGTGGAGGG GCTCAACAGC CCGATTTGAC GCTTACCTAT GATTATGATC CCGACAGCAC CGGCAACAAT TTCCTTGGTT TTGGTGCGCC GAATGTCTTT TCCTGGGACG CATCACAGGA CACGCTTTTA AACTGTGCGA ACGAGTACAC GTATCAATCA GCAGAAACAT TCACTGATGC CGATCAGGTG AAAGCGACTA TTACGCGAAC CTATAACCGC TTTCACCAAA TGATTTCACA GGTGACGAAG AAAAAAGACT GCTCGGTCAC CAAATCCACG ACGTATAACA CAACCGCGAA TACTCCAGTG ACTGGCCAGC CCGCCAATTA CCAGTTCCCT ACGGCAAGCA CGACGACCTG GAGCCGCACC ACAACAGAAA ACGGCAAAAT TGTAACCCAG TCGCGCCAGG AAACGGCCAG TTTCACCTAT GACGATTTCG GCAACATGGT GACACAAAGT TCCACCAAGC AGGATGCGGC CCAAAACTCT GTTTCGTTGG GACAGATCAC TTACGCTTAT TACGAGCCGT CTGGCGAAGA TCAAGATGAC AAAAATGGCC TCGGCTGCCC GGCCGATCCC AATCCCTTCA ATATCACAAG CAACATTCCC CGTTTCATCA AAACACAAAC CACCACGCCG GCGACCACAT CTTACAGCGA TGTTCAGAAC CACGTGGTGC AATATCGTTA TGAGAAGTAT AATTTTCCCG CCCAGGCGAC AACAGCCGGC CTCGACAGCT ATGCCGTCCT CAAGGCTGAA GAACGGCATT TCAGCGGCAA TCAGCTTCTG GCAAAAATAG AATATACGTA TGACAGCACC AGCAGCGAAT TCGGACGGCT TTTGCAGACA GTTGAGACCC ATTATCCGCA AGGAGAGGCT TCCGATAGTT ATGTGACCAC TGCGGTTATG AAAACGACGC CCTCTGACCC TACAATCACG CGCACCACAA CCGTCACGAC ACACGACGGC ATCGGCACCA GTCAGAAGCA AACGGCTTCA CGGTTTACAG GTCGTGTTAC GGAAATCGTC AACGCCCTCG GCGTTGTCTC GCAGGCAAGT TATGACAAGC TTGGCCGCGT TGTAGCTGCT ACAACAGCCG TTGGAACGGA TTACGAAAAT ACCCGTTCGT TCGACTATGT GATCGGCAAT AGTACTGCCC CGTATACAAT CACGGCGACC GATGCATTCG GCAATAAAGG CCAGACCGTA ATGGATGGGC TGGGTGGCTT CCTTACCGGG CAGGTAATGC TGAAGGGCGG TTCGGACTGG CAAGTCATGC AAACGCGCAG TTATGATGAT GCCGGTCGCC TGACGAGCAC AACCAGCAAG GATTTTGATC TGCTTACCAG CACCACCTTC TATGGCCAGA TTACAACAAG CACGAATTAT GATGACTGGG GCAATTCCGA TTGCACGACT GCGTTGAATA TCCAGCATTT TGCCTCAATG GATCCCATTG CACTGACAAA AGCCAAGTAT AGTGTGTATG AAGATAGTTT GTATGAAGAT ACTACGAACG ACGACAAGAA AACCAGCAAA ACAGTTTCGA CGCAGGATGT CTCCCTATAC GCTACCCACA CCGCACTTTA TCCATCCGAT GCTGCAAGTG GTGCATCAGC CTATAGCACC GTGACCCAGA AATATGACGG ATGGAACCGG TTGCGCTCAA GCACGGACGA GCTCGGTCGG ACAACCACCT ACGATTACGA CGCTTTTGAT CGGGTCATCA AAACGACATT ACCGCAGGCG GATGGAGAGA CGAGCGCGAC TGTGGTGACG CGCGCATACA GTCCGGACTC TCCAGCGCAA ATTCTGATTG ATATCTGTGT GAATGGCGTT TCGATGGGCA AGCGTGTTGT GGACGGGTTA GGGCGTTGTA CCAGCCAGAC CTCAGGCGGC CGCAGCTTTA CAGCAGCCTA CGATAGTGAT TGCGGCAGCC TGACTGCGCC AGCCTCTGTC ACCTCGCCTT ATGGCGTAAC CGTAGACTAT ATCTACCAAG CGGAATTGGG TGGCAAGCTT GCCAGCAAAA AGATCGCGTC CAGTTCAGTA ACAGGTAACA CCGGTCCGGG CGCAGACAGC AAAACCCTGA CCTACCAAAA ATGGACCGGA GCACTGGAAA CCGCCACGAG TACGAACGCG CAAGGCAGCT CCAGTATTTC CAACACATTT GAGGCAACGG GCCGCCTTCA AAGTGAAACT TTCTCTCAGG GTGGTTCTGC TGCTACCGCA TACGCCTACA CCACAGCAGG AAAGACAAAA AGCTATACCG ATGTGACCGG CGTTACATGG AGTATCAAGA ATTGTGACCA CTATGGCCGC CCGACACAAG TGGCTGACAC GGATGTCCAG CTTGACCTGT CTTATGATGT GCTGGGCCGC CTCAATTGCT GGAAAGCGAC CGATCTTTCC ACCGGCAATA AACCAACCCT GACCACAACG CTCGCTTGGG ACACGCTTGA TCGTGAAGAC ACCCGGACGG TCACCAGCAG CTCATCTGGA AATAGCTGGT CCCTTACGTC CACCTATAAT GTCAACCATC AGCTTGCCGG CAAAACATTG AAGCGCAATG GCAACTCAGT TCGCGTTGAA ACCTACACTT ACGACGCGCG CAATCGTCTC ACTGAGTATG ACTGCAGCGG CACAGAGCCT GCCCAGGATT CCAAGGGACT GGCCATACAA AAACAGACGT TCACTTATGA TCCATACGAC AACATCACGC AACTTTCCAC GACCTATCAG GACAAGTCGT ACGATCAAAT GCTTTGCGCC TACGACGCTA CCGATCCGTG TCAACTGAAA ACCGTCACCC ATATACAGAC GAGTTCTTTC GGCGTGACCA CAATGCCCGT TGTCACCACG CTCATCTATG ATGAAGCCGG GTGTCTTGTG AACGATGGCG AGGGGCGTAT ATTTACTTAC GATATCGGCA TCAATTGCGG CGCGCTCCTG TCTGTCACGA AAGCAGGCCA GACATCGAAC CTGGCCCATG ACCCCCTGGG CCGCCTCATC GATGAAGATG GAACCAAACT GTTCTATCGG GGCTCCACGC TCGTCAATCA AATCCAGGAT GCCAACAACG TGCGTTTCGT TGCCGGGCCG GGCGGCAATC TTGCTCAGGT GCGCACGGGC AGCAATGCAG GTGTTTGGCT TTCAGGTGCT GATGCCAGCG GATCCATCCT CAGCGTTGAC AGCAGCAATA CGTCCCACCC CCTGACCTAT GGTCCGCATG GGGAGCAATC GACTGATGCC GACGATACCA GCCTGCTTGG TTACAATGGC GAACGCAAAT CTGTGCTCCT CGACGGCTAT CATCTGGGCA ATGGATATCG GCTCTACAGC CCCATATTGC GCCGCTTCAC AGCTCCCGAC AGTCTTAGTC CTTTCGGTCA AGGCGGCATC AATCCCTATG CCTATTGTGC GGGCGATCCA ATCAACAACA CCGATCCAAC CGGGCATATC CGTGTATTTA AAGCGATAAG GAAAGATGTA AGAAGAGTTG AAAGAGATGT AGTGGATGTC GAGGATAAAG TATTAGGGCC CGTGGCGCCG GTGTTGAATG ACGCAGTTAG AGTTGGCGTT CAAGCAGCTG AGGTGGCAGA TGGCGATGAG GAACCGCTGG TAAAAGATGC CGAGAAAGCC GGTGACAGGG CTCTGAAGGA TGGCGCGGAA GATGCCGCAA AAGACGTCGA CAGCGATGAA CCGCCTGCTA AAAAATCCAG ACCCGACGAG CCAAGTGGCG GTGCCCCGAG TGGCAGTGGC AGCGGTGACG CTCCAAGCGG CAGTGGCGGC GGTGATGCCC CGAGTGGCAG TGGCGGTGGC GATGCTCCCG GTGGCAGTGG CGGTGGCGAT GCCCCGGGTG GCAGTGGCGG TGGCGATGCC CCGGGTGGCA GTGGCAGCGA TCATGTGCCT GAAAAGAATA TAAATCAATT GCACAATGAA CGCCGCAAAC TTCTGAATCA GTATTCTGTT GCCAACAATG ATGTAGAGTC TCTGTCTAGA GAACTAAACT ATCGCGCCAA TAATTTACGT CCCAGATTTA GGGATGGTAT GTCGCGGGAG CAAATTCATG ATTTTCATGA AAGGTCCATA TTTAACTATA ACGATACTCA ATCTCGCCTA ACAAATAGGA GAAATCTATT AAATAGAACC ACCAATAGCT TAATTGAAAA TACTAACCAG ATCAATAGTC TCAAAACTGA CAAATTTTGC TTACCTCCCT TGCCATGGGA ACTGTAA
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Protein sequence | MTSLASQFYT RATNFASALS GNVDPRMGQY TINLAIGTLN ANDLLGPSIP LGLSYSPQNT GNMGFGIGFS IGLSSYDTQQ TLLSLSSGEQ YYTDTNLILK QNRLQAVSLQ NDGKNYKVLY KNGTVELLDG PGTANAVKVT RKIFSPEGRY VSLSWNYSQN PPRLQSIQDE AGTSLLSIKY PDASSLQTVL SVRPGTTEGY NVTLSFDNGY LLNASCDALG GSDKTLEWAI DYTGFGSKWP GQWAYKLTSP GGLIETATYS SGHRFPTNAT SMQNLRLPYV TQFTRQPGGG AQQPDLTLTY DYDPDSTGNN FLGFGAPNVF SWDASQDTLL NCANEYTYQS AETFTDADQV KATITRTYNR FHQMISQVTK KKDCSVTKST TYNTTANTPV TGQPANYQFP TASTTTWSRT TTENGKIVTQ SRQETASFTY DDFGNMVTQS STKQDAAQNS VSLGQITYAY YEPSGEDQDD KNGLGCPADP NPFNITSNIP RFIKTQTTTP ATTSYSDVQN HVVQYRYEKY NFPAQATTAG LDSYAVLKAE ERHFSGNQLL AKIEYTYDST SSEFGRLLQT VETHYPQGEA SDSYVTTAVM KTTPSDPTIT RTTTVTTHDG IGTSQKQTAS RFTGRVTEIV NALGVVSQAS YDKLGRVVAA TTAVGTDYEN TRSFDYVIGN STAPYTITAT DAFGNKGQTV MDGLGGFLTG QVMLKGGSDW QVMQTRSYDD AGRLTSTTSK DFDLLTSTTF YGQITTSTNY DDWGNSDCTT ALNIQHFASM DPIALTKAKY SVYEDSLYED TTNDDKKTSK TVSTQDVSLY ATHTALYPSD AASGASAYST VTQKYDGWNR LRSSTDELGR TTTYDYDAFD RVIKTTLPQA DGETSATVVT RAYSPDSPAQ ILIDICVNGV SMGKRVVDGL GRCTSQTSGG RSFTAAYDSD CGSLTAPASV TSPYGVTVDY IYQAELGGKL ASKKIASSSV TGNTGPGADS KTLTYQKWTG ALETATSTNA QGSSSISNTF EATGRLQSET FSQGGSAATA YAYTTAGKTK SYTDVTGVTW SIKNCDHYGR PTQVADTDVQ LDLSYDVLGR LNCWKATDLS TGNKPTLTTT LAWDTLDRED TRTVTSSSSG NSWSLTSTYN VNHQLAGKTL KRNGNSVRVE TYTYDARNRL TEYDCSGTEP AQDSKGLAIQ KQTFTYDPYD NITQLSTTYQ DKSYDQMLCA YDATDPCQLK TVTHIQTSSF GVTTMPVVTT LIYDEAGCLV NDGEGRIFTY DIGINCGALL SVTKAGQTSN LAHDPLGRLI DEDGTKLFYR GSTLVNQIQD ANNVRFVAGP GGNLAQVRTG SNAGVWLSGA DASGSILSVD SSNTSHPLTY GPHGEQSTDA DDTSLLGYNG ERKSVLLDGY HLGNGYRLYS PILRRFTAPD SLSPFGQGGI NPYAYCAGDP INNTDPTGHI RVFKAIRKDV RRVERDVVDV EDKVLGPVAP VLNDAVRVGV QAAEVADGDE EPLVKDAEKA GDRALKDGAE DAAKDVDSDE PPAKKSRPDE PSGGAPSGSG SGDAPSGSGG GDAPSGSGGG DAPGGSGGGD APGGSGGGDA PGGSGSDHVP EKNINQLHNE RRKLLNQYSV ANNDVESLSR ELNYRANNLR PRFRDGMSRE QIHDFHERSI FNYNDTQSRL TNRRNLLNRT TNSLIENTNQ INSLKTDKFC LPPLPWEL
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