Gene Oant_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_2790 
Symbol 
ID5382671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand+ 
Start bp47020 
End bp48000 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content58% 
IMG OID640835466 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001371328 
Protein GI153010114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.580538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG CGCAGGCTTC CACACTCGGA AACTCCGGAG CAAATCCGAC CTCCATCATG 
CCGCAGCGCG GCGGACTCTT TGGGCGCTTG TCGGACCTGT TCTGGCGTCG CCCTGGCCTG 
CTTTTGTTTC TCATGATTAC GCCACCACTG CTGTGGCTGG GCATCATCTA TATCGGCTCG 
CTGATAGCGC TTCTCTTGCA GAGCTTCTTT TCGGTCGATG ATTTCTCCGG TCTGATCGAC 
TATAATTTCA CGCTCGCCAC CTATGCTCAG CTGCTGAATT CCGCCAATCT CGACATCATC 
ATACGCACCG TCCTCATGGC TACGCTGGTC ACGGTCGCTT CGGCTTTCGT CGCCTTTCCC 
ATCGCCTATT ATGCCGCCCG TTACGCACGC GGACGCTGGA AGGCGCTGTT CTATCTCGGC 
ATCATGCTGC CACTCTGGTC GAGCTATCTG GTCAAGGTCT ATGCGTGGAA ACTGATCCTC 
GCCAAGGAAG GCATCCTGAC CTGGATATTC GCAAAACTGC ACCTGTCCTG GCTGCTTGAC 
GGCATCCTGT CCTTACCCGT CATCGGTGGC AATTCGCTGT CGGTCAGCTA TCTCGGCACC 
TTCATCGTCT TCGTCTATAT CTGGCTGCCC TATATGATCC TGCCGACGCA GGCAGCACTT 
GAGCGTGTGC CCGGCAATCT GGTCGAGGCG TCGTCCGATC TCGGCGCGAC GCCGGCGCAG 
ACTTTCCGAA CCGTGCTCAT GCCGCTTGCC ATGCCGGGCA TCATCGCCGG CTCGATCTTC 
ACCTTTTCGC TGACACTTGG CGATTACATC ATTCCGCAGA TCATCGGTTC GTCGCGCCTG 
TTCATCGGAC AGGCCGTCTA TACCCAGCAG GGAACGGCAG GCAATGTGCC GCTGGCGGCT 
GCCTTCTCCG TCGTGCCGAT CGTCATCATG GCCGTCTATC TCTGGATCGC CAAGAAACAG 
GGGGCTTTTG ATGCGCTCTG A
 
Protein sequence
MSGAQASTLG NSGANPTSIM PQRGGLFGRL SDLFWRRPGL LLFLMITPPL LWLGIIYIGS 
LIALLLQSFF SVDDFSGLID YNFTLATYAQ LLNSANLDII IRTVLMATLV TVASAFVAFP 
IAYYAARYAR GRWKALFYLG IMLPLWSSYL VKVYAWKLIL AKEGILTWIF AKLHLSWLLD 
GILSLPVIGG NSLSVSYLGT FIVFVYIWLP YMILPTQAAL ERVPGNLVEA SSDLGATPAQ 
TFRTVLMPLA MPGIIAGSIF TFSLTLGDYI IPQIIGSSRL FIGQAVYTQQ GTAGNVPLAA 
AFSVVPIVIM AVYLWIAKKQ GAFDAL