Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1135 |
Symbol | |
ID | 5378722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 1194725 |
End bp | 1195624 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640833787 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001369684 |
Protein GI | 153008469 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0556811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAAAAC GCACCATGGA TCACTGGAAT GAGGTTCGCA TGTTTCTCGC GGTCGCTCAG GGCGGCACGG TTCGCGCTGC AGCAGATGCG TTGGACGTCA ATCATGCCAC GATCATACGT GGTATCAGTC GGCTGGAAGA AACACTGGAA ACAAAACTGT TCGACAGGCT GGCATCCGGA TACCGGCTTA CGGATGCGGG AAGCGACATT GTTGAACTCG CAGGACAGAT GGCGACAGCC TCATCCCAGA TCGAGGCTCG GATTTTTGGG CGGGATCAGC GTGTCTCCGG GCCTCTGAGG TTCACGCTCC CGATTTCAAT GGCGACTGAC CTGCTGATGC CATCCCTCGC AGATTTCAAG GCCGCCTATC CAGACATTGG GCTGGAAATC GTGGGCTCGA CGTCAATGAT TAATCTCGTC AACCGCGAAG CTGATGTCGC TTTGCGTGTG GTCGTTGGCG GGAAGACGCC ACCCGACAAT TTATACGGAA CAAGACTCTG CCAATTCCAT ATGGCATTCT ACATTCATCG AAATCTGATG ACACAACCGT CACCAGCTTC CGCAACCTGG TTGCTGGGAC CAAACGAACA TGTTCCATCA GATTGGGAGT CAGCGACCGG GATTAAAATG GCTGCAAATC CGGTCCGCTT TGCGGAGATA GGATCACAGT TTCAAGCAAC GCGGGCTGGG ATGGGCATCT CGTTTCTCCC ATGCTTTCTT GGCGATAGCG AACCGAAACT CATCCGCGTA CCCGGAACTG CCAGTTCCTG TGTAGGCGAT ATCTGGCTAC TGACCCATAG CGATACCCGA CAAACAAGGC GCGTCCGCCT GCTATGCGAT CACGTGCGAA GGGCAATACA GGGATTTGTG GGGCTATTGA ATGGCCAAAC AATATCTTAG
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Protein sequence | MRKRTMDHWN EVRMFLAVAQ GGTVRAAADA LDVNHATIIR GISRLEETLE TKLFDRLASG YRLTDAGSDI VELAGQMATA SSQIEARIFG RDQRVSGPLR FTLPISMATD LLMPSLADFK AAYPDIGLEI VGSTSMINLV NREADVALRV VVGGKTPPDN LYGTRLCQFH MAFYIHRNLM TQPSPASATW LLGPNEHVPS DWESATGIKM AANPVRFAEI GSQFQATRAG MGISFLPCFL GDSEPKLIRV PGTASSCVGD IWLLTHSDTR QTRRVRLLCD HVRRAIQGFV GLLNGQTIS
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