Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0376 |
Symbol | |
ID | 5380170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 395471 |
End bp | 398620 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640833029 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001368936 |
Protein GI | 153007721 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.433431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAT TTTTCGTCGA CCGCCCCGTT TTCGCGGCGG TCATTTCCAT TGTGCTCGTG CTGGCTGGCC TGATCTGCAT CCGGATCCTG CCGATTGCGC AGTACCCCGA ACTGACGCCG CCACAGGTGG TCGTCAGTGC AACCTATCCC GGCGCAAGTG CCGAAACGGT GGCGCAGACT GTTGCTGCGC CATTGGAACA GCAGATCAAT GGCGTCGAGA ACATGCTCTA TATGCAGTCC TCGAGCCTTG GTAGCGGTAC GATGCAGTTG ACCGTGACCT TCGCTCTGGG CACCGACCCC GATCAGGCCA CCATCAACGT CAACAACCGC GTACAGCGTG CAACCTCGTC GCTTCCGCAG GAAGTTCAGC GTCTCGGCGT CACGGTGGAC AAGCGTTCCA CCACGATTCT GGGCATGGTC GCCATGTTCT CCGACAGCGA TCGTTATGAC CGCACCTACG TCGGTAACTA CGCGCTGCTG AACGTGGTCG ACGATCTCAA GCGTCTGTCG GGCGTGGGCG ACGTGCAGCT GCTCGGCAAT ATTGACTATT CGATGCGTAT CTGGCTGCGT CCAGACAAGC TGGCGCAGTA TAATCTGACC CCTAGCGATG TCTCGACGGC TATCCAGGAA CAGAACGCAC AGTTCGCAGC CGGTCGTTTC GGCGATCAGC CCGATCCGCA GGCCGGGCCG TTCACCTATA CGGCGACCAC GCAGGGGCGT CTGCCGGATG CCGCTGCATT CGAGAACATT ATCCTTCGTT CCAGCTCTAA CGCCGCAACG CTGCGTCTGA AGGACGTTGC GCGCGTCGAG CTAGGCACGG AAAGTTATCT CGTCGACAGT AATCTTAATG GTACGTCTGC AGTTCCGATT GCAATCTATC TGCAGCCGGG CGCGAATGCG CTCAACACGA TGGAACTCAT TCAGAACCGT ATGAACGAGT TGAAGGCGAG CTTCCCGGCG GGTATCGATT ACTCGATCCC GTTCGATACG ACGAAGTTCA TCAAGGTCTC CATCGAGGAA GTGATACACA CCTTCATCGA GGCGATCATT CTCGTCGTGC TGGTGGTGTT CATCTTCCTG CAGAACTGGC GCGCGACGCT CATTCCAATC ATCGCAGTGC CGATCTCGAT CATTGGCACT TTTGCGGGCA TGTATGTGCT CGGCTTCTCC ATCAACCTCC TGACGCTGTT CGGTCTGGTG CTGGCAATCG GTATCGTGGT CGACGACGCT ATCGTGGTTC TGGAAAACGT CGAACGTATC ATGACGACCG ATAAGCTGTC GCCGCGCAAG GCCGCCATCA AGGCCATGGG TGAAGTGACG GGGCCGGTTG TTGCGATTGT TCTCGTGCTT TGCGCCGTGT TCATTCCGGT TGCCTTCATG GGCGGTCTTG TCGGTGAAAT GTACAAGCAG TTCGCCGTCA CTATCGCGAT TTCGGTGACG TTGTCTGGTC TTGTGGCATT GACACTGACA CCGGCGCTCT GCGCGTTGAT CCTCAAGCCG GGTCATCACG AGCCGATGCT GCCGTTCCGC ATCTTCAACC GCTTCTTCGA GCGGGTGACG GACGGTTACT CTCGTGGCGT TCGCTTCTTT TTGAAGCGCG CTGCAATCGG TCTGATCATT TTTGCAGGCC TTCTTGGTGC TACATATTAT CTTTTTGAAC GGGTTCCGGG ATCGCTGTTA CCTGACGAAG ATCAGGGCTA CCTGTTCAGC GTTGCTGTCC TGCCTCCTGC GGCCTCGTTG GAGCGCACAA CGGCGGTTCT TGATCAGGCG AGCGCGAATA TCCGGAAAAG CCCGGCTGTG GAAAGCGTCT TCGCGGTATC CGGCTTCGAT CTTCTGTCGG GCGGTCTGAA AACCAGTGCG GGCACGATGT TCATCATGCT CAAGGACTGG AAGGAACGCA CGACACCTGA AACCGATGCC CGCAATCTTC CCGGTGCCAT CATGGCCATG AATTCGGGCA TCAAGGACGG GCTTGTGCTG GCATTCAACC CGCCTCCGAT CATGGGCCTC AGCACGACCG GTGGCTTTGA ACTCTATGTT CAGGATCGTA CCGGCGGTGG TGTCGAATCG CTGACGCGTG CAACCAAACT CATCACCGAG GCTGCGGCCA AGCGACCGGA ACTGCAGGGC GTACGCACGA CGTTCGATCC GAATGTTCCG CAATATGACA TTCAGCTTGA TCGCGAAAAG GCGAAGGCTA TGGGTGTGCC GATCAACTCT GTATTCACAG CAATGCAGGC AACGTTCGGT AGTCTCTATG TCAACGACTT TACGCTGTTT GGCCGCAACT ATCAGGTCAA CCTGCAGTCG GAGGCTGAGT TCCGTCGTGA TCCAAGCGAT CTCAAGCATG TCTTCGTGCG GGCCAATTCC GGCAGCATGA TCCCGCTTGA TGCTCTTGTG ACTGTCAAAC GTATTGTTGG CCCGGATCAG CTTGAACGCT TCAACGCCTT CAATGCAGCG AAGATCACCG GTAATCCGGC ACCAGGTTTC ACCTCTGGCG ATTCCATCAA GGCAATGCAG GAAGTGGCTG CGGAGGTTCT TCCGCAGGGC TACCAGATTG CATGGACGGG CTCGGCCTAT CAGGAAGTAA CCACAAGCGG CACAGGCACG CAGGCGATGA TCTTCGGTCT CGTCATGGTG TTCCTGATCC TTGCGGCGCA ATACGAGCGC TGGAGCCTGC CGCTCGCCGT CATTACCGCA GTGCCGTTTG CTATCTTCGG TGCGCTGTTG GCGACCGATC TGCGCGGGTT GACCAATGAC GTGTATTTCC AGATTGGTCT GGTGACACTC ATAGGTCTGG CGGCGAAGAA CGCAATTCTG ATCGTGGAAT TCGCGGTACT CGAGCGAGAG ACAGGCAAGT CCGCGATAGA GGCGGCAGCG TCGGCGGCCC GCTTGCGCTT CCGCCCGATT GTGATGACCT CGCTGGCCTT CATTCTCGGT GTAGTGCCGC TCGCGATCAG TACGGGTGCC GGTTCGGCAA GCCGTCACTC GATCGGTACG GGCGTTATCG GCGGTATGTT GGCTGCAACG TTCATCGCAA CGTTCTTCAT TCCGATGTTC TATAGTCTGA TAGCGCGCAA GCCGCCGAAG CGGCCAGAGG ATGAAGATGT GAATGAAACG ACTGGCCCGA ATGGGCAGAC AGATATCTAG
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Protein sequence | MNRFFVDRPV FAAVISIVLV LAGLICIRIL PIAQYPELTP PQVVVSATYP GASAETVAQT VAAPLEQQIN GVENMLYMQS SSLGSGTMQL TVTFALGTDP DQATINVNNR VQRATSSLPQ EVQRLGVTVD KRSTTILGMV AMFSDSDRYD RTYVGNYALL NVVDDLKRLS GVGDVQLLGN IDYSMRIWLR PDKLAQYNLT PSDVSTAIQE QNAQFAAGRF GDQPDPQAGP FTYTATTQGR LPDAAAFENI ILRSSSNAAT LRLKDVARVE LGTESYLVDS NLNGTSAVPI AIYLQPGANA LNTMELIQNR MNELKASFPA GIDYSIPFDT TKFIKVSIEE VIHTFIEAII LVVLVVFIFL QNWRATLIPI IAVPISIIGT FAGMYVLGFS INLLTLFGLV LAIGIVVDDA IVVLENVERI MTTDKLSPRK AAIKAMGEVT GPVVAIVLVL CAVFIPVAFM GGLVGEMYKQ FAVTIAISVT LSGLVALTLT PALCALILKP GHHEPMLPFR IFNRFFERVT DGYSRGVRFF LKRAAIGLII FAGLLGATYY LFERVPGSLL PDEDQGYLFS VAVLPPAASL ERTTAVLDQA SANIRKSPAV ESVFAVSGFD LLSGGLKTSA GTMFIMLKDW KERTTPETDA RNLPGAIMAM NSGIKDGLVL AFNPPPIMGL STTGGFELYV QDRTGGGVES LTRATKLITE AAAKRPELQG VRTTFDPNVP QYDIQLDREK AKAMGVPINS VFTAMQATFG SLYVNDFTLF GRNYQVNLQS EAEFRRDPSD LKHVFVRANS GSMIPLDALV TVKRIVGPDQ LERFNAFNAA KITGNPAPGF TSGDSIKAMQ EVAAEVLPQG YQIAWTGSAY QEVTTSGTGT QAMIFGLVMV FLILAAQYER WSLPLAVITA VPFAIFGALL ATDLRGLTND VYFQIGLVTL IGLAAKNAIL IVEFAVLERE TGKSAIEAAA SAARLRFRPI VMTSLAFILG VVPLAISTGA GSASRHSIGT GVIGGMLAAT FIATFFIPMF YSLIARKPPK RPEDEDVNET TGPNGQTDI
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