Gene OSTLU_46874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_46874 
Symbol 
ID5004097 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009364 
Strand
Start bp449046 
End bp450383 
Gene Length1338 bp 
Protein Length396 aa 
Translation table 
GC content58% 
IMG OID640419518 
Productpredicted protein 
Protein accessionXP_001420007 
Protein GI145351273 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.183113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.846713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGGGGACTCA AACGGCGCGG CGGCGAACGC GAGGCGACTG GACGAGTCGG CGAACGCGAA 
CTCGAGCGCG ACGAGGGATG AGGGCGCGCG AGCGCCCGTT GATGCGACGA GCGCGGCGAA
GACGGGAACA AAAAGCGCGT CGTCGGGACG TAAGCTCGGG GAGAAATTTT CAAAGGATGT
CGTGGACGAC ATCTATCGCG GGAGCTTTCG AAGCCAAACC GGGGTGAGCC TGAAGTATAT
GTTAGATTTC GGGGCGCAGC CGATTCATCG GCAGTTGATG GTGAGCGCGC AATTTTTGCA
CAACGAACTT CCGGTGCGAT TAGCGCATCG CGTGGCGGAG TTGGAGAACT TGCCGTTCGG
GTTGAGCGAT ATGGCGCAGG TGCTCGACGT GCGGGACTGG TACGTGGAGT CGTTTCGAGA
GCTTCGTAGC TTTCCTCCGA TTGAGAACAT GGAGGACGAG GAAAAGTTTA CGAACATCTT
GAAGAGAATC ATGTACAGGC ACGAAAATGT CGTGCCCATG ATCGCGCGAG CGGTTTTGGA
GCTGAAGGAA CAACTCGAGG CGCAACGGCC GAAGGAGTCC CAGCGACCGG CGACGGCGAG
ACGAGGAGGA ACGTACGCCA CGACGGATTT GAACGAGTTT CCCGAAGTGC ACCAATTCCT
GGATGGGTTT TACATGAGTC GCATCGGAAT GCGGATGCTT ATCGGTCAGC ACGTAGCTTT
GCACGACCCC CCTAAAGACG GGTACATTGG GCTGATTTGC ACGTCCCTGA GCCCACTCGA
GGTGGCTCGA GACGCCATTG CAGACGCGAG GGCGATCTGC ATGCGCGAAT ACGGCGACGC
ACCGGAAGTC GAACTATTCG GCGAGGAGGG TTTCACGTTC GCGTACGTTC CAGGTCACTT
GCATCAAATG TTATTCGAGC TTGTGAAGAA CTCGCTTCGG GCGGTGAGCG ACAAGTACGC
GGATAGCGAC GTGACGCCGC CGCCCATACG CATCGTCATC GCCGAAGGCG CGGAAGACGT
CACGATCAAG GTATCAGACG AAGGTGGTGG GATTCGTCGA AGCGGTTTGG CGAAAATCTG
GACCTACCTG TACAGCACGG CGCGCAGTCC TTTGAAGGAC ATGGACGCTG ACTCAGCGGG
TCCCGTCGTC TTGGCAGGGT ACGGATACGG CTTACCGCTT TCAAGGCTCT ATGCGAGATA
CTTCGGAGGC GATCTTCAAG TGCTTTCGAT GGAGAACTAC GGCACGGATG CGTATCTGCA
CCTCAACCGA CTCGGCAACA TGGCAGAGCC GTTACCTTAG TTAGGGCGGC GGCAGCGCGT
TTCGCGCGAA TATTGAAT
 
Protein sequence
MRAKTGTKSA SSGRKLGEKF SKDVVDDIYR GSFRSQTGVS LKYMLDFGAQ PIHRQLMVSA 
QFLHNELPVR LAHRVAELEN LPFGLSDMAQ VLDVRDWYVE SFRELRSFPP IENMEDEEKF
TNILKRIMYR HENVVPMIAR AVLELKEQLE AQRPKESQRP ATARRGGTYA TTDLNEFPEV
HQFLDGFYMS RIGMRMLIGQ HVALHDPPKD GYIGLICTSL SPLEVARDAI ADARAICMRE
YGDAPEVELF GEEGFTFAYV PGHLHQMLFE LVKNSLRAVS DKYADSDVTP PPIRIVIAEG
AEDVTIKVSD EGGGIRRSGL AKIWTYLYST ARSPLKDMDA DSAGPVVLAG YGYGLPLSRL
YARYFGGDLQ VLSMENYGTD AYLHLNRLGN MAEPLP