Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_45316 |
Symbol | |
ID | 5000704 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | + |
Start bp | 534642 |
End bp | 535529 |
Gene Length | 888 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 65% |
IMG OID | 640416125 |
Product | predicted protein |
Protein accession | XP_001416688 |
Protein GI | 145344330 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0840012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.295548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GATGCGCATG GGACAAAAAG TGCTTTTCCG CAAATGTTCG CGCGCGCGAA TGACGCGCTG ACGCGAGCGC CGCCGGCGCG AAAGCGCGTC GAACGATGCG TGACGATGCG TAATCGCATT CTCTTCGAGC GCGCCGAGAT CGACGCCCGA ACGCGGACGG TGACGCTGCG CGCGGACGAC GCGCGCGCGA CGCACGCGCG AGAGGTGCTG CGAAGCGACG TCGGCGACCA CGTGCGCGCG GGAACGATCG ACGTCGGCGC GTGCGAGGCG ACGATCGCGA CGATGGATGA TGATGAAATC GTGCTGAAGC TCGGAGACGA CGCGCGCGGA CGCGGGAGGC CGGAGATCGA CTTGTTGCTC GCGACGCCGC GGCCTAAAGT TTTGAGGCGG CTGTGGGCGC CGCTCGCGTC GCTGGGCCTC GGTCGTGTCG TGCTGGCGAA CGCGCAAAAG GTGGAGCGAT ATTACTTTGA TAGTAAAGCG TTGGACGCAG AGACGATTCG TGGGGAGATA TTGCGCGGTT TGGAGCAGGC GGGGGATTTT TTGGTGCCGC AAGTGGGCGT GGCGATGCGG TTGCCGCCGG TCGTGGACCG GTTGAAGGGC GCTTTGGGGA ATTCGAGCGT CACGAATGGG TTCGAGTGGT TGTTGGATGG ACCACGTGAG CTCGGTTGGG ATGAGTTCGA CGCGGCCGAT GTGCGCTTGC TGGCGCATCC AGGGGATTCT GGGACGAGCG TGGCGGAAGC GTTGGAGGGC GTCGACGCGC GGCGCTCGCG CGTGCTCATC GCCGTCGGAC CCGAGGGCGG ATGGACGGAT TATGAGCTCG ATTTATTCGA GGGCGCCGGG TTCAAGCGCG TTGGCCTAGG AACGAGAACA TTTACCACGG ACGTGGCG
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Protein sequence | MFARANDALT RAPPARKRVE RCVTMRNRIL FERAEIDART RTVTLRADDA RATHAREVLR SDVGDHVRAG TIDVGACEAT IATMDDDEIV LKLGDDARGR GRPEIDLLLA TPRPKVLRRL WAPLASLGLG RVVLANAQKV ERYYFDSKAL DAETIRGEIL RGLEQAGDFL VPQVGVAMRL PPVVDRLKGA LGNSSVTNGF EWLLDGPREL ALEGVDARRS RVLIAVGPEG GWTDYELDLF EGAGFKRVGL GTRTFTTDVA
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